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Name : Hsero_0541 (Hsero_0541) Accession : YP_003773968.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : major facilitator superfamily permease Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 595990 - 597339 bp Length : 1350 bp Strand : - Note : - DNA sequence : ATGACCCCATCCTCGGGCGGCGCGACGCTGTCCACCACCCCCAGCCTTGCCAGCCAGGCCGAAGACGCGATCTACCGCAA GGTCTGGCTGCGCATCATCCCCTTCCTCTTCATCTGCTATGTGGTCTCCTTCCTGGACCGCATCAACATCGGCTTTGCGC AACTGCAGATGAAGCAGGACCTGGGCTTCAGCGACGCCATGTATGGCCTGGGCGCAGCGATCTTCTATGTCGGTTACGTA CTCTTTGAAGTGCCCAGCAACATGGCGCTGGCGCGCTTCGGCGCGCGCCGCACCTTCTCGCGCATCATGGTGCTGTGGGG ACTGGCCTCGGTGGGCATGATGGCGGTGACCGATGCGGCCCACTTCTATACGCTGCGCTTCCTGCTGGGGGTGTTCGAGG CCGGCTTCTTCCCCGGCATCGTGCTCTATCTCAGCTACTGGTTCCCGGCCCGCCGCCGTGCGGCGGTGATGGCCATCTTC TTTGCCGGCGTGGCCGTGGCGGGGGTGCTGGGGGGACTGGTCTCAGGCTGGATCATGCGTGACATGGCCGGCGTGATGGG GCTGTACGGCTGGCAATGGATGTTTGCCATCGAAGGCGCGCCGGCGGTGGTGCTGGGCCTGCTGGCGATCTTCCTGCTGG CCGACGGGCCGGCCCAGGCCAAGTGGCTCAGCCCGGAAGAACGCAGCTTCCTGCAGGCCCGTCACCAACAGGAAGCGCTG CGCACCCACCATGTCAGCGGCCATTCGCTGGCCGCGCTCAGGCAGGCGCTGTCGCATCGCACCACCTACCTGTTCGCCTT CATCTACTTCGCCCTGACCTGCGGCTCGCTGACGCTGAACTTCTGGATGCCGCTGATGATCCGCGACTTTGGTATCAAGG ACGTGGTCGAGGTTTCGCTCTATAGCGTCATTCCCAATGCCATCGGTGCAGTCGGCCTGATCCTGATCGCGCGCCGTTCC GACCGCCGCAATGAGCGTCACGGCCACTTCGCCGTCTGCACCACCGGCGGCGCACTGGCGCTGGCGGCGCTGACGCTGCA TCCCTCCAGCTTTGCGGTCTCGCTGGGCCTGCTGTCGGTGGCGGCGGTGCTGATCTTCGCGGCCCTGCCCATCTTCTGGT CGCTGCCGCCGGGCCTGTTGCCCGCGCAGACCATCGCCCCGGGCATCGCCTTCATTTCCAGCGTGGGCATTACCAGCGGC ATCGTCAGCCCCTGGCTGATCGGGCTGGTCAAGACACGGACCGGCAACATGGATATCGCGCTCTATATCCTGGCGGGCTT GTTGTTGCTCAGTGGATTGGCGATGTGGAGCCTGATTCCGAGGAAGGCCGCGACGGCTGCCACCGCCTAG Protein sequence : MTPSSGGATLSTTPSLASQAEDAIYRKVWLRIIPFLFICYVVSFLDRINIGFAQLQMKQDLGFSDAMYGLGAAIFYVGYV LFEVPSNMALARFGARRTFSRIMVLWGLASVGMMAVTDAAHFYTLRFLLGVFEAGFFPGIVLYLSYWFPARRRAAVMAIF FAGVAVAGVLGGLVSGWIMRDMAGVMGLYGWQWMFAIEGAPAVVLGLLAIFLLADGPAQAKWLSPEERSFLQARHQQEAL RTHHVSGHSLAALRQALSHRTTYLFAFIYFALTCGSLTLNFWMPLMIRDFGIKDVVEVSLYSVIPNAIGAVGLILIARRS DRRNERHGHFAVCTTGGALALAALTLHPSSFAVSLGLLSVAAVLIFAALPIFWSLPPGLLPAQTIAPGIAFISSVGITSG IVSPWLIGLVKTRTGNMDIALYILAGLLLLSGLAMWSLIPRKAATAATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-55 | 41 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-55 | 41 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-55 | 41 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-55 | 41 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 2e-55 | 41 |
