Gene Information

Name : Hsero_0507 (Hsero_0507)
Accession : YP_003773934.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : enzyme with a TIM-barrel fold protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 553612 - 554424 bp
Length : 813 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGATCCACAATTCCCCGAAGACGAGAGCACCGCAATCCGTCACGACATGCACGGTCGCTGGCCGGCAGCAGCGTC
GTTGGATGAATTTCGCGCCAACCTGGCGGCAGTGCACAGGCGCATTGCTGCGGCGTGCGAACGTGCAGGACGTCCTGCTT
CCAGTGTGCGGCTGCTGCCGGTGAGCAAGACCAAGCCGGAGTCCAGCATCCGTCTCGCCTATGCCGCCGGCTGTTGCCTG
CTCGGTGAAAACAAGCCGCAGGAAGCCTGCCACAAATGGGAAGCCACGCAAGACCTGAGCGGACTGCAATGGTCGGTGAT
CGGCCATCTGCAAACCAACAAGGCCAAGCTGGTCGCCCGCTTCGCCGCCGAGTTCCAGGCGTTGGACAGCCTGCGTGTGG
CGCAAGCCCTGGAGCGCCGCCTGCAGCAGGAAGGACGGGGGCTGGATGTCTTCGTGCAGGTCAATACCTCCGGCGAAGCC
AGCAAGTATGGTCTGGCGCCCGAGGAGGTCGCTCCATTCCTGCGCCAATTGCACGCCTATCCGGCGCTGCGCCTGCGCGG
GCTGATGACGCTCGCCGTGTTTTCGCCCGACCCGGCGCGGGTCAGGCCCTGCTTTAGCCTGTTGCGAAACCTGCGCGAGC
GCCTGCGGCAGGACGTGCCGGCAGGCGCGCAGCTCGATGAACTTTCCATGGGCATGTCGGGTGACTACGAGATCGCCATC
GAAGAGGGCGCCACCGTGGTACGCGTGGGACAGGCGCTCTTCGGCGCCCGCGCCTTGCCGGATTCCCATTACTGGCCCTC
GCCCGACAACTGA

Protein sequence : 
MSDPQFPEDESTAIRHDMHGRWPAAASLDEFRANLAAVHRRIAAACERAGRPASSVRLLPVSKTKPESSIRLAYAAGCCL
LGENKPQEACHKWEATQDLSGLQWSVIGHLQTNKAKLVARFAAEFQALDSLRVAQALERRLQQEGRGLDVFVQVNTSGEA
SKYGLAPEEVAPFLRQLHAYPALRLRGLMTLAVFSPDPARVRPCFSLLRNLRERLRQDVPAGAQLDELSMGMSGDYEIAI
EEGATVVRVGQALFGARALPDSHYWPSPDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-48 55
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-48 55
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-48 55
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 9e-48 55