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Name : tktA (Hsero_0506) Accession : YP_003773933.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 551285 - 553279 bp Length : 1995 bp Strand : - Note : - DNA sequence : ATGAACGAACATCCCCTGCAGCCGCTGGCGCACGCCATCCGCTTCCTCTCCATCGACGCCATCGTGCGCGCCACCGAGGG CCACCAGGGCGTGCCGCTGGGCATGGCCGAGATCGCTACCGCCCTGTATGCGCGCCACCTGCGCTTCAACCCGGCGGCGC CGACCTGGTGGGATCGCGACCGCGTGGTGCTCTCCAATGGCCATGGCTCGATGCTGCTCTATTGCCTGCTCTACCTGACC GGCTACGAACACATCACCCTGGAACAGGTGCGCAGCTTCCGCGAGTTCGGCTCGCACTGCGCCGGCCACCCGGAATACGC GCCCGAGCTGGGCATCGAAGTCACCACCGGCCCGCTCGGTCAGGGCATCGCCAACGCCTTCGGCATGGCGGTGGCCGAGG CCTATCTCAATGCGCGCTTCGGTGACGACATCGTCAACCATCGCACCTATGCCTTCGTCGGCGATGGCTGCCTGCAGGAG GGCATCGGCCAGGAAATGATTTCCCTGGCGGGCCACCTGCGCCTGCACAAGCTGACCTTGCTGTGGGATGACAACCAGAT CACCGACGACGGCAAGACCGAGCTGTCCATCAGCGAGAACGTGGCCGAGCGCTTCCGCGTGGCGGGCTGGCATGTGGTGG AGGTGGACGGCCATGACATCCAGGCAGTGTCACGTGCACTGGATGCCGCACAAGGCTCGGACAGGCCGTCGATGATCGCC TGCCGCACCGTGATCGGTCGCGGCATCCCACGCGTGCAGGGGCAGCGCGGCGGTCACAGCGCGCGCCTGTACGAGGACGA TGCCCAAGCTGCACGCGAACTGCTGCAATGGCCGCACGCTCCCTTCGATGTCCCGCAGGACATCCTTGCGCAATGGCGCA GCTTCGGTCAGCGCAACGACGCCCAGCACCAGCAGTGGCAAGCCCGCGTGCAAGCGCTGCCAGCGGCGCAGCGCGCCGAA TTCGAACGCGTCATGCGCGGCGAATTGCCTAGTGGATGGCAGGAAGTGCTGCTGCCATTCAAGCGCAGTGCGCACGAGCC GGAACAGGCGCAAGGCGGCATCCTGATCTCGGCGGCCATCAACAAGCTGCTGGCCGAGGTGATGCCCGAGCGCATGGTCG GTTGCGCCGACCTGGAAGCGCCGACGGCGCACAAGGGGGGATTGCATGCCTTCACTGCTGATGATCGCAGCGGCGCCTAT GTCCATTGCGGCGTGCGTGAACATCTGATGGGTGCGATGGCCAATGGCATGGCGGCGCACGGTGGCGTCATTGCGCTGTC GGTCACTTATCTGGCCTTTTCGGATTACGAACGTCCGGCCATGCGCATGTCGGCGCTGATGGGATTGCCGGTCAAGTATG TGTTCAGCCATGACTCCATCGGCATCGGCAAGAATGGCCCGACCCACCAGCCGGTGGAAATCCTGGCCTCGCTGCGCGCC ATGCCCAACATGCTGGTGATGCGCCCGGCAGACGCGACCGAGGCGGTCGAATGTTGGGAGATCGCCATGCAACATCGCAG CGGCCCGGTGAGCATGGTCTTTGCGCGCCAGGCCTTGCCGCCGGTGCGCCGCCAGTATGAGGCAGAGAACCGCTGCGCAC GCGGCGGCTATGTGCTGCACGAGGCGCAATGCGGTGCGCGCCAGGTCACGCTGCTGGCCACCGGTTCGGAGGTGGCGCTG GCCTGCGCGGCGCGCGCACAGCTGGAAGCGGCAGGCATCGCCACGGCGGTGGTCTCGCTGCCTTGCTGGGAACTGTTCGA CCAGCAGGACACGGCCTATCGCCAGCAGGTGCTGGGTGAGCAGACGGTGCGCGTGGGTGTGGAAGCGGCGCTGCGCTTTG GCTGGGACCATTACCTGGGCGCCCGCGGCGGCTTTGTCGGCATGCCGGGCTTTGGCGCGCCGGGGCCGGCCGATGTGCTT TATCGTCACTTCAACATCACGGCGGAGGCGGTGGTGGCAGAGGCGCGGCGCTTGCTGGTGCAAGGGACACACTAG Protein sequence : MNEHPLQPLAHAIRFLSIDAIVRATEGHQGVPLGMAEIATALYARHLRFNPAAPTWWDRDRVVLSNGHGSMLLYCLLYLT GYEHITLEQVRSFREFGSHCAGHPEYAPELGIEVTTGPLGQGIANAFGMAVAEAYLNARFGDDIVNHRTYAFVGDGCLQE GIGQEMISLAGHLRLHKLTLLWDDNQITDDGKTELSISENVAERFRVAGWHVVEVDGHDIQAVSRALDAAQGSDRPSMIA CRTVIGRGIPRVQGQRGGHSARLYEDDAQAARELLQWPHAPFDVPQDILAQWRSFGQRNDAQHQQWQARVQALPAAQRAE FERVMRGELPSGWQEVLLPFKRSAHEPEQAQGGILISAAINKLLAEVMPERMVGCADLEAPTAHKGGLHAFTADDRSGAY VHCGVREHLMGAMANGMAAHGGVIALSVTYLAFSDYERPAMRMSALMGLPVKYVFSHDSIGIGKNGPTHQPVEILASLRA MPNMLVMRPADATEAVECWEIAMQHRSGPVSMVFARQALPPVRRQYEAENRCARGGYVLHEAQCGARQVTLLATGSEVAL ACAARAQLEAAGIATAVVSLPCWELFDQQDTAYRQQVLGEQTVRVGVEAALRFGWDHYLGARGGFVGMPGFGAPGPADVL YRHFNITAEAVVAEARRLLVQGTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-123 | 45 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 5e-119 | 44 |
