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Name : ureC (Hsero_4721) Accession : YP_003778095.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 5415734 - 5417434 bp Length : 1701 bp Strand : + Note : - DNA sequence : ATGAGCAAGATTTCCCGTTCGGCCTATGCCGAGATGTTTGGCCCCACCGTCGGTGACCGCGTGCGCCTGGCCGATACCGA GCTGTTCCTGGAGGTGGAGAAGGACTATACGGTCTATGGCGAGGAAGTGAAATTCGGCGGCGGCAAGGTGATCCGCGACG GCATGGGCCAGTCGCAACGCGCCCATGCGGACGTGATGGATACCGTCATCACCAATGCCCTGATCGTGGATCACTGGGGC ATCGTCAAGGCCGACATCGGCATCAAGTCGGGCAAGATCGCCGGCATCGGCAAGGCCGGCAATCCCGACATCCAGCCTGG CGTGACCATGGCCATCGGTGGCGCTACCGAAATCATCGCGGGTGAAGGCATGATCGTCACCGCCGGCGGCATCGACAGCC ACATCCACTTCATCTGTCCGCAGCAGATCGAGGAAGCCCTCATGAGCGGCGTGACCACCATGCTGGGCGGCGGCACCGGT CCTGCCGTGGGCACGGCGGCGACGACCTGCACGCCCGGCCCGTGGCACATCCATTCCATGCTGGCCGCGGCCGACGCCTT CCCGATGAACCTGGGTTTCCTGGGCAAGGGTAACGTCAGCCTGCCGCTACCGCTGGAAGAACAGATCCGCGCCGGCGCCA TCGGCTTGAAGCTGCACGAGGACTGGGGCTCGACCCCGGCGGCCATCGACAACTGCCTGACGGTGGCCGACCGCATGGAC ATCCAGGTGGCCATCCACACCGATACGCTCAACGAGGGCGGCTTCCTGGAACACACCCTGTCCGCCTTCAAGGACCGCAC CATCCACACCTTCCACACCGAAGGCGCAGGCGGCGGCCATGCACCGGACATCATCGCCGCCGTGGGCGAGGGCAACGTGC TGCCGTCCTCGACCAATCCGACGCGTCCCTTCACGGTCAATACGCTGGACGAACACCTGGACATGCTGATGGTCTGCCAT CACCTGGACCCGGCCATCGCCGAAGACATCGCCTTCGCCGAGTCGCGCATCCGCCGCGAGACCATCGCCGCCGAAGACAT CCTGCATGACATCGGCGCGATCTCGATGATGTCGTCCGACTCGCAGGCCATGGGCCGGGTGGGCGAGGTGATCATGCGCA CCTGGCAGACCGCGCACAAGATGAAGGTGCAGCGCGGTTCGCTCAAGGAAGACACTTCCCGCAACGACAACTTCCGTATC AAGCGCTACATCGCCAAGTACACCATCAACCCGGCCATCACCCACGGCATCGCGCACGTGGTCGGTTCGCTGGAGGTGGG CAAGCTGGCCGACATCGTGTTGTGGAAGCCGGCCTTCTTCGGCGCCAAGCCGTCGATGATCTTGAAGAGCGGCATGATCG CAGCCGCCCAGATGGGTGACCCGAACGCCTCGATTCCGACGCCGCAGCCGGTGCATTACCGGATGATGTTCGGAGCCTAT GGCGGTGGCCTGAAGACCTCGATGACCTTCGTCTCGCAGGCCGCCTTCGATGCCGGCATCGGTGAGCAGTTGAAGCTCAA CAAGCCCGTGGTGGCCGTGAAGAACATGCGCAACCTGCGCAAGCGCGACATGATCCACAACGGCGCCACGCCGAAGATGG AGGTCGATGCCGAGACCTATGAAGTGCGCGCCGATGGCGAGTTGCTGGTATGCGAACCGGCGGTCTCGCTGCCGCTGGCG CAACGCTATTTCCTGTTCTGA Protein sequence : MSKISRSAYAEMFGPTVGDRVRLADTELFLEVEKDYTVYGEEVKFGGGKVIRDGMGQSQRAHADVMDTVITNALIVDHWG IVKADIGIKSGKIAGIGKAGNPDIQPGVTMAIGGATEIIAGEGMIVTAGGIDSHIHFICPQQIEEALMSGVTTMLGGGTG PAVGTAATTCTPGPWHIHSMLAAADAFPMNLGFLGKGNVSLPLPLEEQIRAGAIGLKLHEDWGSTPAAIDNCLTVADRMD IQVAIHTDTLNEGGFLEHTLSAFKDRTIHTFHTEGAGGGHAPDIIAAVGEGNVLPSSTNPTRPFTVNTLDEHLDMLMVCH HLDPAIAEDIAFAESRIRRETIAAEDILHDIGAISMMSSDSQAMGRVGEVIMRTWQTAHKMKVQRGSLKEDTSRNDNFRI KRYIAKYTINPAITHGIAHVVGSLEVGKLADIVLWKPAFFGAKPSMILKSGMIAAAQMGDPNASIPTPQPVHYRMMFGAY GGGLKTSMTFVSQAAFDAGIGEQLKLNKPVVAVKNMRNLRKRDMIHNGATPKMEVDAETYEVRADGELLVCEPAVSLPLA QRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 4e-170 | 71 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 4e-170 | 71 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-151 | 65 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-151 | 65 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 2e-151 | 65 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-151 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | YP_003778095.1 | urease subunit alpha | VFG0270 | Protein | 2e-149 | 64 |
