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Name : wecC (Hsero_4193) Accession : YP_003777570.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : NDP-N-acetyl-D-mannosaminuronate dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : 1.1.1.- Position : 4798122 - 4799396 bp Length : 1275 bp Strand : + Note : - DNA sequence : ATGACTTCTGCAAATATCAAGTTGGCCGTCATCGGCCTTGGTTACGTTGGCCTCCCGCTTGCGGTCGAATTCGGCCGAAA GCGCCCGGTGATCGGCTTCGACATTAATCAGCGCCGCATTGATGAACTAAAGAGCGGAAATGACTTTACTCTGGAAACAA CTCCGGAAGAACTCTCCGCCGCGACAAAACTTTCCTTTACTACCAGTCTTGAGGACTTGCGGACATGCAGCTGCTACATC GTCACGGTCCCAACCCCTATTGACGAATATAAGCGTCCCGATCTACCCCCCCTGATAAAGGCCAGTGAAACAGTTGGCAA GGTATTGAAAAAGGGGGACATCGTGATCTACGAGTCCACCGTTTACCCTGGATGTACCGAAGAGGACTGCGTACCGGTAC TGGAACTGCACTCCGGCCTGAAGTTCAATGAGGACTTCTTCTGCGGATACAGCCCTGAACGCATCAACCCTGGCGACAAG GAGCATCGGGTCACCACGATCAAGAAGGTAACATCGGGATCCACGCCGGCAGTAGCCGATATAGTCGACGCTCTGTATAA CGAAATCATTGTCGCTGGCACACACAAGGCTGAAAGCATCAGGGTCGCGGAGGCCGCCAAGGTCATCGAAAATACCCAAC GCGATCTCAACATCGCACTCATTAACGAACTTGCCCTGATCTTCAACAAGATGGGGATCGATACGGAGGCCGTCCTGAAG GCTGCCGGCAGCAAGTGGAATTTCTTGCCGTTCCGCCCCGGCCTGGTGGGCGGCCATTGCATCGGTGTCGATCCTTATTA CCTCACGCACAAAGCCCAGGCAATTGGCTATCACCCCGAAATCATCCTCGCAGGACGGCGACTCAACGACAGCATGGGGA CCTATGTCGTAGCGCAACTGGTCAAGGCGATGACCAAGAAGCGCATACAGGTCGAGGGCGCCAAGGTGCTGGTGATGGGC TTTACCTTCAAGGAAAACTGTCCGGATCTGCGCAACACCAGAGTCGTCGACATTGTTGCCGAGCTCAAGGACTATAACTG TGAGGTCGACGTCTACGATCCTTGGGTCACAACGGAAGAAGCCGAGCATGAGTACGGCATCACTCCGATCGCTGCCCCTC ACCCCAGAAGCTACGATGCCATCATCCTTGCAGTGGCTCACCAGCAATTCAAGGAAATGGGTGCGCAAGCGATCCGCGCC CTCGGCAAGACCAGCACTGTCCTATACGACCTGAAATATGTGCTCAGCACGACTGAATCAGATTTGAGGCTGTAA Protein sequence : MTSANIKLAVIGLGYVGLPLAVEFGRKRPVIGFDINQRRIDELKSGNDFTLETTPEELSAATKLSFTTSLEDLRTCSCYI VTVPTPIDEYKRPDLPPLIKASETVGKVLKKGDIVIYESTVYPGCTEEDCVPVLELHSGLKFNEDFFCGYSPERINPGDK EHRVTTIKKVTSGSTPAVADIVDALYNEIIVAGTHKAESIRVAEAAKVIENTQRDLNIALINELALIFNKMGIDTEAVLK AAGSKWNFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGTYVVAQLVKAMTKKRIQVEGAKVLVMG FTFKENCPDLRNTRVVDIVAELKDYNCEVDVYDPWVTTEEAEHEYGITPIAAPHPRSYDAIILAVAHQQFKEMGAQAIRA LGKTSTVLYDLKYVLSTTESDLRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-145 | 70 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-145 | 70 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-105 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wecC | YP_003777570.1 | NDP-N-acetyl-D-mannosaminuronate dehydrogenase | VFG0431 | Protein | 3e-145 | 70 |
