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Name : tex (Hsero_4187) Accession : YP_003777565.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : transcription accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 4792048 - 4794399 bp Length : 2352 bp Strand : - Note : - DNA sequence : ATGCTGCCTTCTATCGAACAACGACTCGCCCTTGAACTCGCCGCCAAGCCGGTTCAGGTCGCTGCCGCCATCGCCTTGCT GGACGAAGGTGCCACCGTTCCCTTCATCGCCCGCTACCGCAAGGAAGTCACCGGCGGCCTCGACGATGTCCAACTGCGCC TGCTGGAAGAACGCCTGCGTTACCTGCGCGAGCTGGAAAGCCGCCGCGCCGCGATCATCGCCTCCATCGAAGAGCAGGGC AAGATGACGCCCGTGCTGCTGGACGCCATCACTCACGCGGAAGACAAGACCCGCCTGGAAGACCTCTACCTGCCCTACAA GCCCAAGCGCCGCACCAAGGCCCAGATCGCCGCCGAAGCCGGCCTGACCGAACTGGCCGATGCGCTCTTGAACGATCCGA CCCTGAACCCGGAAGAAGAAGCGGCCAAGTTCATCAAGCCCGCCTTCACCACCGACAACGGCGACAACCCCGGTGTGCCC GATACTAAGGCTGCGCTGGACGGCGCCCGCCAGATCCTCATGGAGCGCTTCTCGGAAGACGCCGAACTGCTGCAGAGCCT GCGCGAATACCTGACCGAGCATGGCGTGGTCGAATCCAAGGTAATCGAGGGCAAGCAGGATGCCGGTGAGAAGTTCGCCG ACTACTTCGATTACTCCGAGACCTATTCCACCATCCCCTCGCACCGCGCACTGGCGCTGTTCCGTGGTCGCCGCGAAGAG ATGCTCAACGTCATCCTGCGTCTGGACAGCGAAGAAGAAAAGCCCAAGTGGGACGCCCCGCACAACCCCTGCGAAGGTCG CATCGCCTCGCGCTTTGGCGTCTCGAACAAGGGCCGTGCCGCCGACAAGTGGCTCTCCGACACCGTGCGCTGGGCCTGGC GCGTGAAGGTCTTCATGCACCTGGAAACGGAGCTGATGACCAACCTGCGCGAGAAGGCTGAAGCTGAGGCCATCAACGTC TTCGCCCGCAACCTGAAGGACCTGCTGCTGGCCGCGCCGGCCGGCCCGCGCGCCACCATGGGCCTGGACCCGGGCCTGCG TACCGGCGTCAAGGTCGCCATCGTCGACGCCACCGGCAAGGTCGTGGCCACCGACACCATCTATCCGCACCAGCCGCGCA ATGACTGGAACGGTTCGCTGCACACGCTCTCGCAACTGGCCGAGAAGCATAATGTCTCGCTGATCTCGATCGGCAACGGC ACCGCCTCGCGTGAAACCGACAAGCTGGCGCAAGACCTGATCAAGCTGCGTCCGGAATTGAAGCTCACCAAGATCGTGGT CTCCGAAGCCGGTGCGTCGGTGTATTCCGCTTCCGAATTCGCTTCCAAGGAATTGCCGGACCTGGACGTGTCGCTGCGTG GCGCGGTCTCGATTGCGCGGCGCCTGCAGGATCCGCTGGCCGAGCTGGTCAAGATCGATCCCAAGTCCATCGGCGTGGGC CAGTACCAGCACGATGTGAGCCAGTCGCAGCTGGCGCGTTCGCTCGACGCCGTCGTCGAAGACTGCGTCAACGCCGTGGG CGTGGATGTCAACACCGCTTCCGCGCCGCTGCTGGCGCGCGTGTCGGGTCTGAATGCGAGCGTGGCGCAGAGTATCGTCT CGTACCGCGACATGAAGGGCATGTTCAGTTCGCGCGCGGCGCTGCGCGAAGTGCCGCGCCTGGGTGAGAAGACCTTCGAG CAGGCCGCCGGCTTCCTGCGCGTGATGAATGGCGAGAACCCCCTGGATGCCTCGGCGGTCCACCCCGAATCCTATCCGCT GGTGGAAAAGATCCTGGCCGACATCAAGAAGGACGTCAAGAGCGTGCTGGGCCAGACCTCGCTGTTGAAGGGCCTGTCGC CGGCCAAGTACGCCGATGAGAAGTTCGGCGTACCCACCGTCACCGACATCCTCAAGGAACTGGACAAGCCCGGCCGCGAC CCGCGTCCTGAATTCACCACCGCCACCTTCAAGGAAGGCGTGGAAGAGATCAAGGACCTGCGCCCCGACATGATCCTCGA AGGCGTGGTCACCAACGTGGCGGCCTTTGGCGCCTTCGTCGATATTGGCGTGCACCAGGATGGCCTGGTGCACATCTCGG CGCTGTCCAACACCTACGTGAAGGATCCGCACACCGTGGTCAAGGCCGGCCAGGTGGTCAAGGTCAAGGTGCTGGAAGTG GACGAGAAGCGCAAGCGTATCGCCCTGACCATGCGCCTGAACGACACCGCCCCGGCGCCGGGCGCGCGCAACGAACAGCG CGGCGACCGCACTGATTCGCGTCGCCTGTCGCAGCACCAGAACCAGCGCGGCCGCGAGCAGGCCCCGGCCAACAATGCGA TGGCGGCGGCGTTTGCGAAGTTGCGTGGATGA Protein sequence : MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLRYLRELESRRAAIIASIEEQG KMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEAGLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVP DTKAALDGARQILMERFSEDAELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMHLETELMTNLREKAEAEAINV FARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGKVVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNG TASRETDKLAQDLIKLRPELKLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKGMFSSRAALREVPRLGEKTFE QAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVKSVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRD PRPEFTTATFKEGVEEIKDLRPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV DEKRKRIALTMRLNDTAPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPANNAMAAAFAKLRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 61 |
