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Name : Hsero_4056 (Hsero_4056) Accession : YP_003777434.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : major facilitator superfamily permease Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 4652463 - 4653800 bp Length : 1338 bp Strand : - Note : - DNA sequence : ATGGCAAATGCAAGCCAGGGCAGTGCTGTGCAGTTTGACGGGCTGTACAAGAAAGTGACGTGGAAAATCCTGCCCTGGCT GCTGCTGGGCTATGTGATTGCCTACCTCGACCGGGTCAACGTGGGCTTCGCCAAGCTCTCCATGCTGAGCGACCTGGGCA TGTCGGAGGCGGCCTATGGGCTGGGGGCGGGTATCTTCTTCCTGGGTTATTTCATCTTCGAAGTGCCCAGCAACCTGATC CTGCATCGCGTGGGCGCCAAGATCTGGATCGCGCGCATCATGATCACCTGGGGCATGATTTCCTCGCTGATGGCCTTTAC AGCCCCCATCGCCCAGTGGTTGGGCGTGAGCAATGAAACGGTCTTCTACACCTTGCGCTTCCTGCTGGGGGCCTCGGAGG CGGGCTTCTTCCCTGGCGTGATCCTCTACATGACCTACTGGTATCCCGCGGCCATGCACAGCCGCGTGATGGCGGTGGTA TTGCTGGGCAATCCCTTTTCCTACATCCTCGGCGGTCCCATCAGCGGGGCGCTGATGCAGTTCATGGGCAGCGGCGACTC GCTGGCCGGCTGGCAATGGATGTTCGTCATCGAAGCGCTGCCGGCTTGTTTGCTGGGTATCGTCATCCTGTTCGTGCTCT CCAATGACATCGCCAGCGCCAAGTGGCTGGCGCCGGAGGAAAAGGCCGAGCTGGCCCGTCGCCTGGCCGCCGAGAACAAG GAAAAGGTCAACGTCCCGCTCAAGAGCCTGTACGCCTTGCCCATCCTGTGGTTCCTGGCGCTGGTGTATCTGCTGATGAT GATCGGCAGCTACGGCATCAATTTCTGGGCGCCCACCATCATCCGCGACGCGGGCGTGAAATCGGTGCTCGACATCGGCA TGATCTCGGCCATTCCCTACATTCTCGGCGCGACCGCCATGGTGTTCATCACCCGTCATGCCGAGAAGGCGGGCAAGCAT CGCAGCTATTCGGTGGCGGTCTCCATGGTCGCCGGCCTGGCCCTGGTGCTGTGCACGCTGTTCCCGCACAACATCTACAT CACCCTGGCGGGCATCGCCATCGCGGTGGGCGGCAGCCTGACCTCGATTGCCTTGTTCTGGGGCTTCCCGGGCGCCTACT TCACCGGCGCCACGGCTGCCGCAGGGATCGCGATCATCAATTCCGTGGGCAATCTCGGCGGCTTCGTCGGGCCTTACCTG CTTGGGGCATTGACCACTGCCTTCGGCTCGCCCCGTTACGGCCTGATGATGCTGGGAGGCGCCTTGTTCCTGGCCGGTGT GCTCATCGCGCTGGGCGGCCGCAAGCGTGGTCCCGCTGCGGTGACGGCCAGCGCCTGA Protein sequence : MANASQGSAVQFDGLYKKVTWKILPWLLLGYVIAYLDRVNVGFAKLSMLSDLGMSEAAYGLGAGIFFLGYFIFEVPSNLI LHRVGAKIWIARIMITWGMISSLMAFTAPIAQWLGVSNETVFYTLRFLLGASEAGFFPGVILYMTYWYPAAMHSRVMAVV LLGNPFSYILGGPISGALMQFMGSGDSLAGWQWMFVIEALPACLLGIVILFVLSNDIASAKWLAPEEKAELARRLAAENK EKVNVPLKSLYALPILWFLALVYLLMMIGSYGINFWAPTIIRDAGVKSVLDIGMISAIPYILGATAMVFITRHAEKAGKH RSYSVAVSMVAGLALVLCTLFPHNIYITLAGIAIAVGGSLTSIALFWGFPGAYFTGATAAAGIAIINSVGNLGGFVGPYL LGALTTAFGSPRYGLMMLGGALFLAGVLIALGGRKRGPAAVTASA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-71 | 46 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-71 | 46 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-71 | 46 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 6e-71 | 46 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 7e-73 | 46 |
