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Name : Hsero_3954 (Hsero_3954) Accession : YP_003777333.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : NAD-dependent aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.3 Position : 4530852 - 4532306 bp Length : 1455 bp Strand : + Note : - DNA sequence : ATGTCTCTCCATCTTCAGCACTTTATTGCAGGCGAGGCCACCGAGGCCTCCGACGGCCAGCGCATGAACCTGGTCAATCC CATCAACGAGGAAATCTACGCCAGTGCAGCGCAAGGCACGGCAGCCGATGTGGCGCGCGCAGTCGCTGCGGCCAAGGCGC AACTGGAAGGCGGGGCCTGGAGCAAGCTCTCGGGCCTGCAACGCGGACAACTGCTGCACAAGCTGGCGGCGCTGGTCGAG CGTGATACCGATCTGCTGGCCGACATGGATGCCCGCGCCATCGGCCGCTCGCCCATGGAGCCGCGCATGATGGATGTGCC CAATGCCATCAGCCATCTGCGCGCTGCGGCCGGCTGGGCCAACCAGATGGAAGGTCGCACCATTCCCACCGCTGGCTATA TGGGCAAGCCCACCTTGTCCTATACGGTGCGCGAACCGATCGGCGTGGTCGGGGCGATCCTGCCGTGGAATGCGCCGTTG ATGATCACCAGCTGGAAAGTCGCGGCGCTGCTGGCGGCAGGTTGCACGGTGGTGATCAAGCCGGCTGAGGAAACTCCGCA GTCGGCGTTGCACCTGGCGCGCCTGGCGCAGGAGGCAGGCTTCCCGGATGGCGTGATCAATGTGGTGACCGGCTATGGCA ATAGCGTCGGACGCGCCCTGTGCGAGCACCCCGATGTGGCCAAGATCAGCTTTACCGGCAGCCCCGAGGCCGGCCGCGCG ATCCAGCGCATTGCCGGTGAGCAGTTCAAGCGCGTGACCCTGGAGCTGGGCGGCAAGAGTCCGCAGATCGTCTTTGATGA CGCGCCTTTCGAGGATGCACTCTTCGGTTGCACCCTGGGCCTGTTCGTCAACCAGGGCCAGGTGTGCGCGGCGGGTTCGC GCATCCTGGTGCAGCGCAGCCTGGCGCAGCGCTTTGCCAAGGCGCTGGCCGAGGCCGCCGCCGGCATCACGGTGGGCGAT CCCAGCCAGCCGGGTGTGCGCATGGGGCCAGTGGCCAAGAAGGCCCAGTTCGAGCGCGTGAACCGCTACATCCAGCAAGG CCTGGATGAGGGCGCCACGCTGCTGGCCGGCGGCGTCTCGCGTCCGGACAAGGGCTGGTTCGTGCAGCCGACCATCTTTG CCGATGCCAACAATGGCATGAGCATTGCCCGCGAGGAAATCTTCGGGCCGGTGGGCACCATCATCAGCTTCGATACCGAA GAAGAAGCCATCGCCCTGGCCAATGATTCCAAGTACGGACTGGCCGCTACGGTCTGGACCACCAACCTGGCGCGCGCGCA TCGCGTGGCTGCGGGTGTGAAGGTGGGTGCGGTGGGCGTCAATTGCTGGAGCCCGCTGGACGCCAACCTGCCCTGGGGCG GCATCAAGGACAGCGGCATGGGACGCGAAGGCGGTCTGGCCGGTGCACTGGCCTACACCGAAGAAAAGACCGTGACCGTG CTGCTGGCTTCCTGA Protein sequence : MSLHLQHFIAGEATEASDGQRMNLVNPINEEIYASAAQGTAADVARAVAAAKAQLEGGAWSKLSGLQRGQLLHKLAALVE RDTDLLADMDARAIGRSPMEPRMMDVPNAISHLRAAAGWANQMEGRTIPTAGYMGKPTLSYTVREPIGVVGAILPWNAPL MITSWKVAALLAAGCTVVIKPAEETPQSALHLARLAQEAGFPDGVINVVTGYGNSVGRALCEHPDVAKISFTGSPEAGRA IQRIAGEQFKRVTLELGGKSPQIVFDDAPFEDALFGCTLGLFVNQGQVCAAGSRILVQRSLAQRFAKALAEAAAGITVGD PSQPGVRMGPVAKKAQFERVNRYIQQGLDEGATLLAGGVSRPDKGWFVQPTIFADANNGMSIAREEIFGPVGTIISFDTE EEAIALANDSKYGLAATVWTTNLARAHRVAAGVKVGAVGVNCWSPLDANLPWGGIKDSGMGREGGLAGALAYTEEKTVTV LLAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 1e-63 | 41 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-62 | 41 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 2e-66 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hsero_3954 | YP_003777333.1 | NAD-dependent aldehyde dehydrogenase | VFG0082 | Protein | 1e-62 | 41 |
