Gene Information

Name : Hsero_3941 (Hsero_3941)
Accession : YP_003777320.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4514334 - 4515698 bp
Length : 1365 bp
Strand : -
Note : -

DNA sequence :
ATGAAGAGAACGATCCTCGGTTTGTCCATCCTGGCGGTGGGCGCGACGCTGGCGCACGCTGCTTCGGTGCAAGATCTGGG
CACTACCCTGACACCGCTGGGCGGCGACAAGGCTGCCGGCCAGGGCGTGCCGGAATGGAAGGCGGAAAACGTGGAACTGC
CGGGCTGGTCCTACGGCAAGCTGCGCAAGGACTATTTCAAGTACAAGGATGAAAAGCCCACCGAGGTCATCGATGCCTCC
AACGTGGACAAGTACGCCGACCATCTCACGCCGGGACAGGTGGCCCTGATCAAGCAGGTCAAGGGCTACAAGATGGATAT
CTATCCCACCCACCGCTACTGTGCGGCGCCGGACTTCGTGGTCGAGAATACCAAGAAGAACGTGGCCGACGGCAAGATCG
GCGCTGACGGCTGGAGCCTGGCCGAAGCCAATGTGCCGGGCATTCCCTTCCCCTTGCCCAAGACCGGCCTGGAAGTGATG
TACAACAGCAAGATGCGCTATCGCGGCCTGGGCGTGGACTTCCCCAATACCATCACGGCAGTCTCGCCGCGCAAGGGCAG
CAATGAGTGGATCAAGGCCAGCCAGCAGTTGACGCTGTTCTATCCCTCCAACGTCAAGGGCAGCACCAAGCTCTCCACGC
TGGGCGGGGTCGAGTTCTACACCTACGTCGCCTATTCTTCGCCCACCGCACTGGCCGGCCAGGCGCTGACGGTGACCACC
TACCTGAACCGCCCCGGCGCCGAGACCTTCTATTATTTCCCTGGCCAACGTCGCGTGCGCCGCATGCCGTCCTATGCCTA
CGATGCACCGCAGATCGGCATGGAAAACCAGTACACCATGGATGAACCGACCGTCTTCAACGGCACCATGGACCGCTTCG
ACTGGAAGCTGGTCGGAAAAAAAGAAATCTATATCGCCTACAACAGTTTCGGGGCCAACAACTTCAAGGCCAATTTCGAC
GACATCGCCAAGCCTGACTTCGTGGCCGAGAACGCCCGCCGCTACGAGCTGCACCGCGTCTGGGTGGTGGAAGCCACGGT
CAAGCCGGGTGTGCGCCACCTGGCGCCCAAGCGCACCTTCTATGTCGATGAGGATAGCTGGAACCTGGTGCTCTCCGATG
ACTACGACGCCCAGAACAAGCTGTGGAAGCACCGTGAGGGCTACATCATTCCGGTCTATGAGACCGGCGCCTGCGACCTC
TCCGGTTTTGCCCAGTACAACCTGGCCGAAGGCCGCTACCTGATGGATTCGCACTCGGCCGGCACCGGCAAGGACATCCG
CTGGGAGACCGAGGCCAAGGACAATCCGCGCCTGCGTGACAACTTCTACAGCGCCGACAACCTGCGCGCCATCAGCGACC
GCTGA

Protein sequence :
MKRTILGLSILAVGATLAHAASVQDLGTTLTPLGGDKAAGQGVPEWKAENVELPGWSYGKLRKDYFKYKDEKPTEVIDAS
NVDKYADHLTPGQVALIKQVKGYKMDIYPTHRYCAAPDFVVENTKKNVADGKIGADGWSLAEANVPGIPFPLPKTGLEVM
YNSKMRYRGLGVDFPNTITAVSPRKGSNEWIKASQQLTLFYPSNVKGSTKLSTLGGVEFYTYVAYSSPTALAGQALTVTT
YLNRPGAETFYYFPGQRRVRRMPSYAYDAPQIGMENQYTMDEPTVFNGTMDRFDWKLVGKKEIYIAYNSFGANNFKANFD
DIAKPDFVAENARRYELHRVWVVEATVKPGVRHLAPKRTFYVDEDSWNLVLSDDYDAQNKLWKHREGYIIPVYETGACDL
SGFAQYNLAEGRYLMDSHSAGTGKDIRWETEAKDNPRLRDNFYSADNLRAISDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01515.1 hypothetical protein Not tested PAGI-1 Protein 4e-120 56