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Name : Hsero_3939 (Hsero_3939) Accession : YP_003777318.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : protein exporter of the Resistance-Nodulation-Cell Division (RND) superfamily protein Function : - COG functional category : R : General function prediction only COG ID : COG1033 EC number : - Position : 4510092 - 4512359 bp Length : 2268 bp Strand : - Note : - DNA sequence : ATGGCGGTGTTCTCGCTGCAGCTGCGCATGGACGCCGGCTTCGAGAAACAGATTCCCTCGGACCATGAATACGTCGCCAC GCAGCATCAGTACCGCGACGAACTGTTCGGGGCCAATCGCTTGAACATCGTGCTGCGCGCCCGCCACGGCAGCATCTGGA CCAAGGAAGGGCTGACGCGCCTGAACGCCATGACCCAGGCCGTCATGTTCCTGCCCAACGTCAATCGCCTGGGCGTGCAG TCGCTGTGGACGCCCAATACGTTCGTCAACGAGATCACCGAAGAAGGCTTTCGCGCCGATCCCGTCATCGCGGGCACGGT CACCCCGGAGAGCCTGACGCCCGAGGTCATCGCCAGCATTCGCGACAGCGCCAACAACGGCGGCTTCGTCGGTACGCTGG TCTCGCGCAAGCAGGACAGCGCCATGATCATTGCCGAGATCAATGAATTCGACGCCAACGGCAAGAAGGTCGACTACCTG GCCTACAACAAGCTCTTGAACGACTTGCGCGCCAAGTACGAGAACGCCGACTTCGAAGTGCAGATCATCGGTTTTGCCAA GCAGATTGGCGATGTGGCCGATGGCGCCCAGGGTGTGCTCAAGTTCTGCATCATGGCCTTGCTGCTGACGGCGCTGGCGG TGTACTGGTATTGCCGTTCGCTGCCCTTTACGCTCTTGCCCATCGTCTGTTCGCTGGTGTCGCTGGTATGGCAGTTCGGT ACCTTGCACCTGCTGGGTTACGGGCTGGACCCATTGGCGGTGCTGGTGCCTTTCCTGGTGTTTGCCATTGGCGTGTCGCA CGGGGTGCAGCAGATCAATTACATCGTGCGCGGCATCGCCGCCGGCATGGGCTGCGAAGAGGCGGCGCGCGCCAGCTTCC GTGGCCTGCTGGTGCCGGGCGTGCTGGCGCTGGTGACGGCCTTCGTCTCCTTCATCACGCTCACGCTCATTCCCATTCCC ATGGTCAAGGAGCTGGCCATCACCGCCTCCATCGGCGTGGGCTACAAGATCATCACCAACCTGGTCATGCTGCCGCTGGC GGCCTCGCTGCTGAAGGTCAACAAGGCCTATGCCGACGCCGCCATGCGCGCCCAGCAGAAGCGTGCGCGCTGGCTGCAGG TGTTTGCCCGCGCGGCCCATCCGCGCAATGCCCGCGTGATCGTCGTGGTGACGCTGGCGCTGTTTGCCGCCTCGGTCTGG TACAGCAGCGATCGTCTGGTGGGCACCTTGCAGGCGGGGGCGCCCGAGCTGCGCGCCGATTCGCGCTACAACCTCGATGC CAAGTCCATCTCGGACAACTATGACACTGGCCTGGACTGGCTCTCGGTGATCCTGGCCACGCCCGAGAATTCCTGCGACA AGGTGGCCTTCGGGCGCTACCAGGAACAGTTCGATGCGGCCATGCGCCATGTGCCGGGGGTGATGTCGGTGAGCTCCTTC GCCGAGCAGATGAAGATCTACAACGAAGGCTACAACGAGGGCAATCCCAGCATGTATTCGGTGCCGCTGGACCCGGCCAA CTATGCGGCGCTGGCGGTGGAGATCGGGCGGGTGCGCGGCTTCCTCTCCAAGGATTGCAGCATGCTGGCCACCCACCTCT ACCTGACCGACCACAAGGCCTCCACCATCAACGGCATCATCGCGGCGGTCAAGCAGTATCGCGCCGCGCATCCCCTGCCG GGCCTGACCATCCGCCTGGCTGCGGGCAATGCGGGCGTGATCGCGGCTGTCAATGAAGAGGTGGAAAAGTCGGAGCTGCC GATGATGCTGTATGTCTATGCCGCCATCATCGTGCTGGTGTTCGCAGTCTATCGCGACCTGCGCGCCGTGGTGGCCTGCT GCCTGCCGCTCACCGTGGCCACCTTCATCGGCTATGCCTTCATGAAGCAGCTGCAGATCGGGCTGACCGTGGCGACCTTG CCGGTGATGGTGCTGGCCGTGGGCATTGGCGTGGACTATGCCTTCTATATCTATAGTCGTCTGCAGATGCACCTGGCCGC TGGTGAAGCCATCGCCGTGGCGCTGGAGAAATCGATCCAGGAAATCGGCGTGGCGACCATCTTTACCGCCATCACGCTGG CCATCGGTGTGGCGACCTGGTCCTTCTCGCAGCTGAAGTTCCAGGCCGACATGGGCAAGCTGCTGGCCTTCATGTTCATC GTCAACCTGATCATGGCCATGACCGCCTTGCCGGCCTTTGCTGTGGTGCTGGAACGGATGTTCCCGCGCAAGGGCAAGAT CAAGGTCAACAGCATGATGAACCATTGA Protein sequence : MAVFSLQLRMDAGFEKQIPSDHEYVATQHQYRDELFGANRLNIVLRARHGSIWTKEGLTRLNAMTQAVMFLPNVNRLGVQ SLWTPNTFVNEITEEGFRADPVIAGTVTPESLTPEVIASIRDSANNGGFVGTLVSRKQDSAMIIAEINEFDANGKKVDYL AYNKLLNDLRAKYENADFEVQIIGFAKQIGDVADGAQGVLKFCIMALLLTALAVYWYCRSLPFTLLPIVCSLVSLVWQFG TLHLLGYGLDPLAVLVPFLVFAIGVSHGVQQINYIVRGIAAGMGCEEAARASFRGLLVPGVLALVTAFVSFITLTLIPIP MVKELAITASIGVGYKIITNLVMLPLAASLLKVNKAYADAAMRAQQKRARWLQVFARAAHPRNARVIVVVTLALFAASVW YSSDRLVGTLQAGAPELRADSRYNLDAKSISDNYDTGLDWLSVILATPENSCDKVAFGRYQEQFDAAMRHVPGVMSVSSF AEQMKIYNEGYNEGNPSMYSVPLDPANYAALAVEIGRVRGFLSKDCSMLATHLYLTDHKASTINGIIAAVKQYRAAHPLP GLTIRLAAGNAGVIAAVNEEVEKSELPMMLYVYAAIIVLVFAVYRDLRAVVACCLPLTVATFIGYAFMKQLQIGLTVATL PVMVLAVGIGVDYAFYIYSRLQMHLAAGEAIAVALEKSIQEIGVATIFTAITLAIGVATWSFSQLKFQADMGKLLAFMFI VNLIMAMTALPAFAVVLERMFPRKGKIKVNSMMNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01517.1 | transport protein | Not tested | PAGI-1 | Protein | 0.0 | 67 |
