Gene Information

Name : Hsero_3938 (Hsero_3938)
Accession : YP_003777317.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : oxidoreductase
Function : -
COG functional category : R : General function prediction only
COG ID : COG4447
EC number : -
Position : 4509068 - 4510051 bp
Length : 984 bp
Strand : -
Note : -

DNA sequence :
ATGAACGTCTGGAAGACATTGCTGTGGCTGGCGCTGGCGGGTTGCAGCACGCTGGCGGCGGCGCAGGGAATGGAGCCGGT
GCCGGTGCGTGCTGCCGTGGCGGATCGCTTTGCCGATCGCGCCATGATGCTCGATGCCGCACTGGCCGGCGAGCGTGTGG
TGGCGGTGGGGGCGCGCGGCGAGGTGATCCTCTCCGACGATGGCGGCAGGCAATGGCGGCAGGCGCGCCAGGTGCCGGTG
GATTTCACGCTGACCGCGGTGAGCTTTGTCGATGACAAGGAGGGCTGGGCGGTCGGACATGGCGGTGTGGTGATCCATAC
CGCCGACGGCGGCGAGACCTGGCAATTGCAGCGCAGCGCCACCGATGTGGACCAGCCCTTGTTTACGGTCTATTTCCGCG
ACCGTGAGCATGGCTGGGCGGCGGGCCTGTGGTCCTTGCTGTTGCAGACCGAGGATGGCGGCAAGACCTGGACCACCCTG
CACCTGCCAGTGGCCGCAGGCAGCAAGCGCAGCGACCTGAACCTGCTGCGCTTCTTCCCTGGCAGCGGCGACACGCTCTA
CCTGGCCGCTGAGCAAGGCACGCTGTTCCGCAGCACCGATGCGGGCCAGCACTGGGACATCCTGGCCACTGGTAGCAAGG
CATCGCTATGGAGCGGGGCGGTGGCGCAGCCGGCGGGGGCGCTCATCGTGGCCGGCCTGGGCGGCAAGCTCTTGCGCAGC
ACCGATGGCGGCAGCCAGTGGCAGACCGTGGCGCTGCCCACCAGTGGCTCCATTACCCGCGTCCAGGCCACGCCTGGGCT
GCTGACAGCCGCTTCGCTGGAAGGCAAGATCCTGCAAAGCCGTGACGAGGGCGTGAGCTGGCAGGTCTTGTGGAGTGCGC
CGCAGGGCTTGACGACGATCCTGGTGAACCGCCTTGGGCAGGTGCTGCCCTTTTCCAAGGAGGGCGTGCTCAAGCCGGTT
GAAGGCGTGGCGGCCAAGCCTTGA

Protein sequence :
MNVWKTLLWLALAGCSTLAAAQGMEPVPVRAAVADRFADRAMMLDAALAGERVVAVGARGEVILSDDGGRQWRQARQVPV
DFTLTAVSFVDDKEGWAVGHGGVVIHTADGGETWQLQRSATDVDQPLFTVYFRDREHGWAAGLWSLLLQTEDGGKTWTTL
HLPVAAGSKRSDLNLLRFFPGSGDTLYLAAEQGTLFRSTDAGQHWDILATGSKASLWSGAVAQPAGALIVAGLGGKLLRS
TDGGSQWQTVALPTSGSITRVQATPGLLTAASLEGKILQSRDEGVSWQVLWSAPQGLTTILVNRLGQVLPFSKEGVLKPV
EGVAAKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01518.1 putative oxidoreductase Not tested PAGI-1 Protein 8e-51 48