Gene Information

Name : Hsero_3874 (Hsero_3874)
Accession : YP_003777260.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : amino acid ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 4435300 - 4436034 bp
Length : 735 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGCCATCGTTAAGATCAAGGATCTGCACAAGAGCTTCGGCAGCAACAAGGTGTTGAACGGCGTGTCGCTGGATGT
ACAGAAGGGCCAGATGGTGGCCATCATCGGCAAGAGCGGTTCGGGCAAGAGCACGCTGCTGCGCTGCCTGAATGGCCTGG
AAAAGGTGGACGCCGGCGACATCCAGGTCTGCGGCCATGACATCCACCATCCGGACAAGCTGAACCTGCGCGAGCTGCGC
AAGCAGGTCGGCATCGTCTTCCAAAGCTACAACCTGTTCCCGCACCTGACCGTGGAGCGCAACATCACCCTGGCGCTGAC
CACCATCAAGAAGATGTCGACCGAGCAAGCCAAGACCATCGCCCACAAGGTCTTGCAGCTGGTAGGCCTGGAGAACAAGA
AGGATGCCTATCCCGAGCAGCTGTCGGGGGGCCAGGCGCAGCGCGTGGCCATTGCCCGTTCGCTGGCGATGGCGCCGGAA
CTGATGCTCTTCGATGAAGTGACCTCGGCGCTGGACCCGGAACTGACCGCCGAAGTGCTCAAGGTGATGGAAGACCTGGC
GCGTGGCGGCATGACCATGGTGCTGGTCACGCACGAGATGGCCTTTGCCCGCAAGCTGGCCGACGTGCTGGTGTTCATGC
ACCAGGGCCAGGTGTGGGAGATCGGGCCGCCGGATGAACTGTTCAGTCATCCGAAGACGGCCGAATTGCAGAAGTTCGTA
TCCAGCGATCTGTGA

Protein sequence :
MSAIVKIKDLHKSFGSNKVLNGVSLDVQKGQMVAIIGKSGSGKSTLLRCLNGLEKVDAGDIQVCGHDIHHPDKLNLRELR
KQVGIVFQSYNLFPHLTVERNITLALTTIKKMSTEQAKTIAHKVLQLVGLENKKDAYPEQLSGGQAQRVAIARSLAMAPE
LMLFDEVTSALDPELTAEVLKVMEDLARGGMTMVLVTHEMAFARKLADVLVFMHQGQVWEIGPPDELFSHPKTAELQKFV
SSDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 4e-40 42
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 1e-40 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41