Gene Information

Name : yncB (Hsero_3784)
Accession : YP_003777170.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : NADP-dependent oxidoreductase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 4338560 - 4339591 bp
Length : 1032 bp
Strand : -
Note : -

DNA sequence :
ATGACAAAGACGACTCCCCAGACCAACCGCCGCATCGTGCTGGCCTCGCGCCCCACCGGCGCGCCCACGGCCGACAATTT
CCGCCTCGAAGAAGTGGCCGTTCCGGCGCTGGAAGAAGGGCAACTGCTGCTGCGCGGCCAGTGGCTGTCGCTGGACCCCT
ACATGCGCGGCCGCATGAGCGATGCGCCGTCCTACGCACCGCCGGTGGAGATCGGCGGCGTCATGACCGGTGGCGTGGTC
TCGCGGGTGGAAGCCTCGCGCCATCCTGAATTCAAGGAAGGCGACCTGGTGATGGCCTACACCGGCTGGCAGGAATACGC
CGTCTCCGATGGCACGGGCGTCAACAAGCTGCCCGCCGGCTTCGCCCATCCCTCGCATGCATTGGGCGTGCTGGGCATGC
CCGGCTATACCGCCTATGCCGGCCTGATCGACATCGGCCAGCCGCGCCCTGGTGAAACAGTCGTCGTGGCTGCAGCCACC
GGCGCGGTGGGGTCCCTGGTCGGCCAGATCGCCAAGCTGCGCGGCTGCCACGTGGTGGGTATCGCCGGCGGTGCGCAGAA
GTGCGAAGCGGCGGTCAAGGAGCTGGGCTTCGACGCCTGCATCGATCACCGTGCTGCCGACTTCCCCGAACAACTGAAGG
CCGCCTGTCCGCGCGGCATCGATGTGTATTTCGAGAACGTCGGCGGCGCCGTGCTCGACGCCGTCTTCCCGCTGTTGAAC
ATCCACGCCCGCGTGCCGGTGTGCGGCCTCATCGCGCACTACAACGGCGGCACGCTGGCCACCGACAGCGCCGCGATCCT
GCGCCGCACGCTGACCCAGCGCATGCGCGTGCAGGGGTTCATCATCTTCGACTACTACGTCAACCGTCCCGACCTGCACG
CCGCCTTCCAGCAGGAAGTGGGCAACTGGCTCAAGCAAGGCAAGCTGCACTATCGCGAAGACGTGGTGCAAGGGCTGGAG
AATGCGCCCGAGGCCTTCATGGGTCTGCTGCAAGGCAAGAACTTCGGCAAGCTGGTGGTCAAGCTGGACTGA

Protein sequence :
MTKTTPQTNRRIVLASRPTGAPTADNFRLEEVAVPALEEGQLLLRGQWLSLDPYMRGRMSDAPSYAPPVEIGGVMTGGVV
SRVEASRHPEFKEGDLVMAYTGWQEYAVSDGTGVNKLPAGFAHPSHALGVLGMPGYTAYAGLIDIGQPRPGETVVVAAAT
GAVGSLVGQIAKLRGCHVVGIAGGAQKCEAAVKELGFDACIDHRAADFPEQLKAACPRGIDVYFENVGGAVLDAVFPLLN
IHARVPVCGLIAHYNGGTLATDSAAILRRTLTQRMRVQGFIIFDYYVNRPDLHAAFQQEVGNWLKQGKLHYREDVVQGLE
NAPEAFMGLLQGKNFGKLVVKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 2e-57 45