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Name : kdpA (Hsero_3779) Accession : YP_003777165.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.10 Position : 4330094 - 4331875 bp Length : 1782 bp Strand : - Note : - DNA sequence : ATGGACAGCAACAACTACTACCAGCTCGGCCTCTACCTGGCGGTCCTGCTGCTGCTTTCCCTGCCGCTGGGCTGGTACAT GGCCCGCGTGATGGAAGGCAAGTCACGCGTCAACCGCCTCTTCGGCGGCATCGAGCGCGTCTTCTACCGTCTCTGCGGCA TCAGCCGCGAACACGAGATGGACTGGAAACAATATGCCATCGCCGTCGTGCTGTTCAACTTCATCGGCGCCATCGCGGTC TACCTGTTGCAGCGCCTGCAGCAATGGCTGCCGCTGAACCCGGCAGCGCTGGCCAGTGTCAGCCCGGACTCCTCCTTCAA CACGGCGCTGAGCTTCGTGACCAATACCAACTGGCAAGGCTACGCTGGTGAATCCACCATGAGCTACCTGACCCAGATGG CTGCGCTGGCGCTGCAGAATTTCCTGTCGGCGGCCACCGGCATCGCCATTGCGTTCGCACTCATCCGCGGCTTTGCCCGC CACAGCAGCAAGGGCATCGGCAACTTCTGGGTCGACATGACGCGCAGCACGCTCTATGTGCTGCTGCCGCTGTCGGTGGT GTTGGCGCTGGTGCTGGTGCAGCAGGGCAGCATCCAGAACTTCCGCGCCTACCAGGACGTGAAGACCCTGGAAGTGACGC ACTACACCGTGCCCAAGCTGGACGCCGCAGGGCAGCCGCTCAAGGACGCCAAGGGCGAACCGGTGACCGAAGCGCAAAGC ACCGACAAGCAGACCCTGCCCATGGGGCCGGTGGCCTCGCAGGAAGCCATCAAGATGATTGGCACCAATGGCGGCGGTTT CTTCAACGCCAACTCGGCCCACCCCTATGAGAACCCGACGCCGCTCTCCAACTTCCTGCAGATGCTGGCCATCCTCATCA TTCCGGCGGCGCTCTGCACCAGCTTCGGCGTGCTGGTGGGCGACCGTCGCCAGGGTTGGGCCATCTTGGCGGCGATGACG CTGCTGTTCGTGGTCATGACGCTGGTGCTGATGTATGCCGAGTCGCAACCCAATCCCATGCTGGCTTCGCTGCACGCCTC CGGCCCCGGCATGATGGAAGGCAAGGAAACCCGCTTCGGCATCCCGGCCTCGGCGCTGTTTGCGTCCATCACCACGGCCG CTTCCTGCGGTGCCGTCAACGCCATGCACGACTCACTCTCGCCCTTGGGCGGACTGGTGCCGATGCTGCAGATGCAGCTG GGCGAAGTGGTGTTCGGCGGCGTCGGCTCGGGCTTGTACGGCATGCTGATCTTCGCCGTGCTGGCGGTGTTCATCGCCGG CCTCATGATCGGCCGCACACCCGAATACCTGGGCAAGAAGATCGGCGTGTTCGACATGAAGATGATGTCCATCGCCATCC TCATGACCCCGGCCCTGGTGCTGATCTTCACGGCGCTCTCGGTGATGGTGGAGGCGGGCCTGGCCGGCATCGCCAATCCG GGTGCGCACGGTTTCTCCGAAATCCTCTACGCCTTCAGCTCGGCGGCCAACAACAACGGCAGCGCCTTTGCCGGACTCTC GGCCAACACGCCGTACTACAACATCACCACCGGCATCTGCACCTGGCTGGGCCGCTTCGGCATCATCGTGCCGGTGCTGG CCATGGCCGGTTCGCTGGCCGGCAAGAAGCGCCTGGCCGCCACCTCCGGCACCTTGCCCACGCATGGCCCGCTGTTCGTG GCGCTGCTGATCGGCGCGGTGATCCTGGTGGGGGCGCTGACCTATGTGCCGGCGCTGGCGCTGGGACCGGTGGTCGAGCA CCTGCAGATGATGGCGATGTAA Protein sequence : MDSNNYYQLGLYLAVLLLLSLPLGWYMARVMEGKSRVNRLFGGIERVFYRLCGISREHEMDWKQYAIAVVLFNFIGAIAV YLLQRLQQWLPLNPAALASVSPDSSFNTALSFVTNTNWQGYAGESTMSYLTQMAALALQNFLSAATGIAIAFALIRGFAR HSSKGIGNFWVDMTRSTLYVLLPLSVVLALVLVQQGSIQNFRAYQDVKTLEVTHYTVPKLDAAGQPLKDAKGEPVTEAQS TDKQTLPMGPVASQEAIKMIGTNGGGFFNANSAHPYENPTPLSNFLQMLAILIIPAALCTSFGVLVGDRRQGWAILAAMT LLFVVMTLVLMYAESQPNPMLASLHASGPGMMEGKETRFGIPASALFASITTAASCGAVNAMHDSLSPLGGLVPMLQMQL GEVVFGGVGSGLYGMLIFAVLAVFIAGLMIGRTPEYLGKKIGVFDMKMMSIAILMTPALVLIFTALSVMVEAGLAGIANP GAHGFSEILYAFSSAANNNGSAFAGLSANTPYYNITTGICTWLGRFGIIVPVLAMAGSLAGKKRLAATSGTLPTHGPLFV ALLIGAVILVGALTYVPALALGPVVEHLQMMAM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 1e-85 | 44 |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 2e-85 | 44 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 2e-69 | 41 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-69 | 41 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-69 | 41 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-69 | 41 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-69 | 41 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 7e-70 | 41 |
