Gene Information

Name : Hsero_3578 (Hsero_3578)
Accession : YP_003776965.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG0179
EC number : -
Position : 4104828 - 4105511 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence :
ATGAGCTTTGCCATTCCCGCCCCCGCCCAGGCCACGGTTGCCGTGGTCGGCGGTGCAGCTTTCCCGGTTCGCCGCATCTA
TTGCGTAGGGCGCAATTACGCCGCCCACGCCCGTGAAATGGGCCACGATCCGGACCGCGAGCCGCCGTTCTTCTTCATGA
AGCCGGCTGACGCCGTCGTGCCCACCGACTCCGTGGTGCCGTATCCGGTCGCCACTTCCGACTATCACCATGAGATCGAA
CTGGTGGTGGCGCTGGCCAAGGGGGGGCGCAATATCCCGGTGGAACAGGCGCTGGAACTGGTGTTCGGCTACGCCGTGGG
CCTGGACATGACCCGCCGCGACATCCAGAGCCAGGCCAAGAAGCTGGGCCGCCCCTGGGACATGGCCAAGGGTTTCGACC
AGTCCGCCCCCTGCGCGCCCATCGTGCCGGTGGCGCAGGCTGGCCACCCCGACCAGGGCGCCGTCTGGCTCAAGGTCAAT
GGCGAAGTGCGCCAGCAGGGCGACCTGGCGGACCTGATCTGGAGCGTGGCCGAGACCATCTCCTATCTGTCGGGCCTGGT
CGAGCTGTTCCCGGGCGACCTGATCTTCACTGGGACGCCTGAAGGCGTGGGGGCTGTCGTCAAGGGCGACAAGCTGCAAG
GCCATGTTGACGGCTTGCCGGACATCAATATCACCATTGGCTGA

Protein sequence :
MSFAIPAPAQATVAVVGGAAFPVRRIYCVGRNYAAHAREMGHDPDREPPFFFMKPADAVVPTDSVVPYPVATSDYHHEIE
LVVALAKGGRNIPVEQALELVFGYAVGLDMTRRDIQSQAKKLGRPWDMAKGFDQSAPCAPIVPVAQAGHPDQGAVWLKVN
GEVRQQGDLADLIWSVAETISYLSGLVELFPGDLIFTGTPEGVGAVVKGDKLQGHVDGLPDINITIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43829.1 putative isomerase Not tested LEE Protein 1e-59 63