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Name : npd (Hsero_3501) Accession : YP_003776888.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : 2-nitropropane dioxygenase Function : - COG functional category : R : General function prediction only COG ID : COG2070 EC number : 1.13.12.16 Position : 4009351 - 4010427 bp Length : 1077 bp Strand : - Note : - DNA sequence : ATGCCACGTTCACTGTCCACCCCGCTGACCCGCAAGTTCGGCATCGATTTTCCCATCGTCCAGGGCCCCATGAATGGCGG TTCCACGCCGGAGATGGTCGCGGCGGTTTCCAATGCCGGCGGCATCGGTGCGCTGGCGGCGGCCAATTTCGATGTCCAGA CGATGCGCACGAAGGTCAACGCCATTCGTTCCCTGACCACCAAACCTTTCTGCGTCAATCTTTTTGTCCTGGAAACACCC GCGCCGACGCCCGGCGAGATCCGTGACGCGCTGGACCGGCTGCAGCCTATACGGGCCGAGCTGGGCCTGCCGCCGGCAGC CGCGCCCGAGCGATACTGCGAAGAATTTCGTGAGCAGCTTGATGCGCTCATCGCGCTGAAGGCGCCGGTGGCGAGTTTTA CCTTCGGCCTGCTCGACGCAGCGTCCATCGAGCGCCTGCACGCTGCCGGCAGCCTGGTCATCGGAACCGCCACCAACGTG GCCGAGGCGCTTGCCTGGCAAGCCAATGGCGCCGATGCCATTTGCGCACAGGGGGCCGAGGCTGGCGGCCACCGCGGGAC CTTCATCGGTCATCCCGACGCCAGCATGATCGGCACCCTGGCGCTCGTGCCGCAGATCGTCGATGCAGTCGCGCTTCCTG TCATCGCTGCAGGCGGCATCATGGATGGCCGCGGCATCGCAGCCGCATTGACATTGGGCGCGCAGGCCGCGCAGCTCGGA ACGGCTTTCCTGATGACGGCGGAGTCCCCCATCCACGCGGCATGGCAGGAAAAGATCCGCCTCTCCACCGACACCTCCAC GCGCACCACCCGGACATTTACCGGCCGCCCGGCGCGCGGCATCCTCAACGACTTCATGCTGCGCATGGGGCGATACGAGC AGGAGCTGCCCGCCTATCCGGTCCAGCATGCACTGACTACCGAAATCCGCAAAGCCGCTGGCCAGGCCAACCGCCCCGAG TTCATGTCGCTCTGGGCCGGGCAGGCCGCAGGGATGAGCCGCCGACGTGCCGAAGCCATTCCTGCGGCTGAACTGGTGCG GGTGCTGGTTGCAGAGACCCAGGCGGCGTTGGCTTGA Protein sequence : MPRSLSTPLTRKFGIDFPIVQGPMNGGSTPEMVAAVSNAGGIGALAAANFDVQTMRTKVNAIRSLTTKPFCVNLFVLETP APTPGEIRDALDRLQPIRAELGLPPAAAPERYCEEFREQLDALIALKAPVASFTFGLLDAASIERLHAAGSLVIGTATNV AEALAWQANGADAICAQGAEAGGHRGTFIGHPDASMIGTLALVPQIVDAVALPVIAAGGIMDGRGIAAALTLGAQAAQLG TAFLMTAESPIHAAWQEKIRLSTDTSTRTTRTFTGRPARGILNDFMLRMGRYEQELPAYPVQHALTTEIRKAAGQANRPE FMSLWAGQAAGMSRRRAEAIPAAELVRVLVAETQAALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0043 | YP_251958.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-43 | 42 |
