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Name : mutS (Hsero_3270) Accession : YP_003776659.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 3745076 - 3747760 bp Length : 2685 bp Strand : + Note : - DNA sequence : ATGACCAAAGACCTCGCCGCCCATACTCCGATGATGCAGCAGTATCTACGCATCAAAGCGGACCACCCCAACACGCTGGT GTTCTACCGCATGGGCGATTTCTATGAACTGTTCTTCGAAGACGCCGAGAAGGCCTCACGCCTGATGGGCGTCACGCTCA CCCAGCGTGGTTCCTCCAACGGCACTCCCATCAAGATGGCTGGCGTGCCCTTCCACTCGGTGGAGCAATACCTGGCGCGC CTGATCAAGCTGGGCGAATCGGTGGCCATCTGCGAGCAGATCGGTGACCCGGCCACCAGCAAGGGGCCGGTGGAGCGCAA GGTGGTGCGGGTGGTCACGCCGGGCACGCTGACCGATTCCGACCTGCTGCCGGAAAAGGCCGAACGCTGCCTGCTGGCCA TGCAACTGGTGCCGTCGAAGTCGCGCAAGCAGATGCAGGTGGGGCTGTCCTGGCTGTCCATGGCTAGCGGTGCGCTGAAG ATGATGGAATTCACGGTCGAGGCTGCGCTGCTGGATGGCCGCGTGAAGCAGGAACTGGAGCGCATCTCGGCTGCCGAAGT GCTGGTGGCCGACGGCCAGCTGGAATGGTGCGAACCGCTTTTGCCCAACCGCGCCGTGACCGTGCCGGACTGGCATTTCG ACCAGCCCAGCAGTGAAAAGGCCCTGCTCGACCAACTGGGCGTGGCCACCCTGCACGGCTTTGGCGCCGACGGCCTGGGA CCGGCCATCTGTGCAGCCGGCGCCCTGCTGCGCTACGCGCAATCGACCCAGGGACGTGGCCTGCAGCACGTGCGCACCCT GACGGTCGAATCCGAGAACGAATTCATCGGCCTGGATGCCGCCACCCGCCGCAACCTCGAGCTGACCGAGACCATCCGCT CGCAGGACGCCAACGCGCTGGCCCCCACCCTCTTCTCCACACTGGACCATTGCCGCACCGCCATGGGCTCGCGCCTGCTG CGCCACTGGCTGCACCATGCGCTGCGCGACCAGCAGGTGGCGCGCGCCCGTCATGCCGCCATCAACGCCCTGATGCGCAC CGACGCCTGCTCGGGCCTGTCGGCCACGCTGGCGGCGGTGCCCGATATCGAACGCATCACCACCCGCATCGCCCTGCTGT CGGCGCGTCCGCGCGACCTGGCGGGCCTGCGCGCCGGCCTGCAGCAACTGGGCTCGCTGCGCGCCTACGTGGAGATGTGC GGGCGCGACGCCGACGCATCACTGCTGACGCAGCTGCACGAGGACCTGGCCACACCCGTGGAATGCCTGGACCTGCTGGA ACGCGCCATCATGCTGGAACCGGCGGCGATGGTGCGCGACGGCGGCGTGATCGCACGCGGCTTCGATGCCGAGCTCGACG AACTGCGCGGCCTGTCCGAGAACGCCGGCCAGTACCTGCTGGACCTGGAAGCGCGCGAACGCGAACGCACCGGCATCGCC AACCTGCGGGTGGAATACAACAAGGTGCATGGCTTCTATATCGAGGTCACGCACGGCCAGACCGACAAGGTGCCGGAAGA TTACCGCCGCCGCCAGACCCTCAAGAATGCCGAGCGCTACATCATCCCCGAGCTCAAGGCCTTCGAGGACAAGGCGCTGT CGGCCCAGGAGCGCTCGCTGTCGCGCGAGAAGTTCCTCTACGAACAGCTGCTGGGCGACATGGGCGCGCACATTGTGCGC CTGCAGGCCATCGCCCATGCACTGGCCCAGCTCGACACCCTGGTGGCGCTGGCCGACCATGCCGTGCGCAACAACTGGTG CGCGCCGCAACTGGTCGATGAGCCCTGCATCCAGATCGAACAGGGCCGCCACCCGGTGGTGGAAAACCAGATCGAGCGTT TCATCGCCAACGATTGCCAGCTGGCCGCCGAGCGCCGCCTGTTGCTCATCACCGGCCCCAACATGGGGGGTAAATCGATC TTCATGCGGCAGGTGGCGCTGATCACGCTGCTAGCCTATGTGGGCAGCTTCGTGCCGGCCACCAGCGCCGTGATCGGGCC GGTGGACCGCATCTTCACCCGGATCGGCGCGGCCGACGACCTGGCCGGCGGGCGGTCGACCTTCATGGTGGAAATGACCG AATCGGCCGCCATCCTCAACAATGCCACCGAACATTCGCTGGTGCTCATGGATGAGGTCGGGCGCGGCACTTCCACCTTC GACGGGCTGGCCCTGGCCTGGGCCATTGCCAAGCATCTGATCGACGTCACGCGCAGCTTCACGCTCTTTGCCACCCACTA CTTCGAACTGACGCAGTTGCCCGAGATCCATCCGACGGCGGCCAACGTGCATCTCTCGGCAGTGGAACACAAGGACAGCA TCGTCTTCCTGCACGCGGTACAGAGCGGCCCGGCCTCGCAGAGCTATGGCCTGCAGGTGGCGCAGCTGGCGGGCGTACCG GCGCAGGTCATCCGCGCCGCGCGCAAGCATCTCTCGGCGCTGGAAAGCCAGTCCATGCAGGCCACGCCGCAGTTCGACCT GTTCAGCGCCCCGGCATTCGCCACACCCGGGACACAGGATGAGCCGGACCCAGCCGATGAACGCAGTGAGTCCGATGCGG TCGAACCCGATCCGCTGGCGCAGGCGCTGCTGCAGACGCTGGCGCAGATCGACCCCGATGCGCTTACACCGCGCCAGGCG CTGGAGGCCTTGTATCAGCTGAAGGCCTTGCAAGCGCCGCAGTGA Protein sequence : MTKDLAAHTPMMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSNGTPIKMAGVPFHSVEQYLAR LIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDSDLLPEKAERCLLAMQLVPSKSRKQMQVGLSWLSMASGALK MMEFTVEAALLDGRVKQELERISAAEVLVADGQLEWCEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLG PAICAAGALLRYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRSQDANALAPTLFSTLDHCRTAMGSRLL RHWLHHALRDQQVARARHAAINALMRTDACSGLSATLAAVPDIERITTRIALLSARPRDLAGLRAGLQQLGSLRAYVEMC GRDADASLLTQLHEDLATPVECLDLLERAIMLEPAAMVRDGGVIARGFDAELDELRGLSENAGQYLLDLEARERERTGIA NLRVEYNKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSLSREKFLYEQLLGDMGAHIVR LQAIAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQIEQGRHPVVENQIERFIANDCQLAAERRLLLITGPNMGGKSI FMRQVALITLLAYVGSFVPATSAVIGPVDRIFTRIGAADDLAGGRSTFMVEMTESAAILNNATEHSLVLMDEVGRGTSTF DGLALAWAIAKHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAVQSGPASQSYGLQVAQLAGVP AQVIRAARKHLSALESQSMQATPQFDLFSAPAFATPGTQDEPDPADERSESDAVEPDPLAQALLQTLAQIDPDALTPRQA LEALYQLKALQAPQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 1e-178 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_003776659.1 | DNA mismatch repair protein | VFG0562 | Protein | 0.0 | 51 |
