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Name : fhaC (Hsero_3252) Accession : YP_003776641.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : hemolysin activation/secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2831 EC number : - Position : 3716538 - 3718292 bp Length : 1755 bp Strand : - Note : - DNA sequence : ATGAGCCAGGATCCTCAGGGGAGCCTGCGCAGGCACGTGCGCCTGCGTGGGAGGGGCAGCTTTTTGCCCATCGTTTTGTG TCTGTGCCAGGCGGGCGTGATGTCCAGCGCCTGGGCGCAGGCCGATCTGTCGACGCAGCAATTCCAGCGCCAGCAAGAGC GCGAGCGCGAATTGCGCCGGCAGCAGGAGCGCGGTCCCGACGTACGCCTGCCGGCGCAACCCGGTGCGGCAGCCGAGGCC GTCCCCGCTCAGGAATCACCGTGCTTTGCGGTGCATCGCGTCGTGCTGGATGGCCCCGGCAGCGCGCGCTTCGACTGGCT GCTCGATCTGCCAGAAGCCAATCCCGGCGGGCGCTGCCTGGGCGTGCAGGGGATCAACGCCGTGATGTCGGCCTTGCAAA ACGCCATCGTCGCCCGCGGCTACGTCACCACACGCATACTGGCCCAGCCGCAGGATATTGCCAGCGGCGAGCTGCGCCTG ACCATCGTCCCAGGCAAGATCCGCGCGATCCGCTTTGCCGACAATGCCGATCCCCGCGCCACCCAGTGGAATGCACTGCC GGCATCGCCCGGCGATCTCCTCAATCTGCGCGACATCGAGCAAGGACTGGAAAACCTCAAGCGCGTCCCCACCGCCGAGG CCGACGTCCAGATCGCCCCCAGCGAAGGCAAGGATGCGGCCCCCGGCGACAGCGACCTGGTCATCAGCTACCAGCAGGGC ATCCCCATTCGCCTGACCCTGTCGGTGGACGATAGCGGCACCAAGGCCACCGGCAAATACCAGGGCAGCGCCACCGTCTC GCTGGACAACTGGCTCACCCTCAACGATCTCTTCTACATCAGCTTCAGCCACGATCTGGGCGGCGGCGACCCCGGCGCGC GCGGCAGCCAGAGCCAGGTGGTGCATTACTCGCTGCCGCTGGGTTACTGGGCGCTGGCCTTCACCAACAGCAGCAATCGC TATCACCAGGCCGTGGCCGGCATCAACCAGACCTATCTCTACAGCGGCCAGAGCGAGACCAACGAATTGAAACTGAGCCG CCTGGTCTACCGCGACGCCGTGCGCAAGACCACGCTCTCGTTCAAGGGCTTCGTGCGCTCTTCCAGCAACTATGTCGATG ACACCGAAGTGCAGGTGCAGCGCCGTCGCGTGGCCGGTTGGGAGATGGGGCTGGCGCATCGCGAATTCATCGGCGAGGGA ACCCTGGATCTGGCCCTGGCCTACAAGCGTGGCACCGGCGCCTTCGACGCCATGGCCGCGCCCGAGGAAGCCTTTGGCGA AGGCACTTCGCGCTTTCGTCTCATGACCGCCGACCTCAACCTGAACGCTCCCTTTGCCTTGCCCATGCCCTGGGGCAAAC AGGCCATGCGCTACACCCTGGGCGCGCGCGCCCAATGGAACCGCACGCCCCTGACCCCGCAAGACAAGTTTTCGCTCGGC GGGCGCTACAGCGTGCGCGGCTTCGATGGCGAGAGCAACCTGCTGGCCGAGCGCGGCTGGTATGTGCGCAATGAACTGGC CGCCGCCCTGGGCGCGAGCAAGCAAGAGATCTATGCCGGCCTGGACTATGGCGAAGTCGGCGGTCCCTCCACGGAGCTGC TGGTCGGACGCCGCCTGGCCGGCGCAGTACTGGGCCTGCGCGGTGCGCTGGGCCGCACCAATTACGAAGTCTTCGCCGGC GTGCCGATTTCCCAGCCAGACCGATTCAAGACCTCCCCCCTCACCGCCGGCATGAGTCTGATGTGGTCTTTCTGA Protein sequence : MSQDPQGSLRRHVRLRGRGSFLPIVLCLCQAGVMSSAWAQADLSTQQFQRQQERERELRRQQERGPDVRLPAQPGAAAEA VPAQESPCFAVHRVVLDGPGSARFDWLLDLPEANPGGRCLGVQGINAVMSALQNAIVARGYVTTRILAQPQDIASGELRL TIVPGKIRAIRFADNADPRATQWNALPASPGDLLNLRDIEQGLENLKRVPTAEADVQIAPSEGKDAAPGDSDLVISYQQG IPIRLTLSVDDSGTKATGKYQGSATVSLDNWLTLNDLFYISFSHDLGGGDPGARGSQSQVVHYSLPLGYWALAFTNSSNR YHQAVAGINQTYLYSGQSETNELKLSRLVYRDAVRKTTLSFKGFVRSSSNYVDDTEVQVQRRRVAGWEMGLAHREFIGEG TLDLALAYKRGTGAFDAMAAPEEAFGEGTSRFRLMTADLNLNAPFALPMPWGKQAMRYTLGARAQWNRTPLTPQDKFSLG GRYSVRGFDGESNLLAERGWYVRNELAAALGASKQEIYAGLDYGEVGGPSTELLVGRRLAGAVLGLRGALGRTNYEVFAG VPISQPDRFKTSPLTAGMSLMWSF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 5e-96 | 47 |
| NMB1762 | NP_274762.1 | hemolysin activation protein HecB | Not tested | IHT-C | Protein | 1e-92 | 45 |
