Gene Information

Name : Hsero_3166 (Hsero_3166)
Accession : YP_003776556.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Virulence
Product : Mn2+/Zn2+ ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3625338 - 3626180 bp
Length : 843 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGCGGCCATCTCCCTGGAAAACCTCACCGTCAGCTACCGCCGCCATCCGGCCCTGCACCATGTCAACGGCGCTTT
CGAGCGCGGTTCGCTGACCGCCGTGGTCGGGCCCAATGGCGCCGGCAAGAGCACCCTGCTCAAGAGCATGCTCGGGCTGG
TCCGCTGCAATGACGGGCGGGTGTTGACCCACGTGGATGCCCGCCGCATCGCCTACCTGCCCCAGCAGGCCGAGATCGAT
CGCAGCTTCCCCATCTCGGTGCTGGATTGCGTGCTGCTGGGCTATTGGCAGGCCAAGGGCAACTGGGGCGGCATCGACGC
CGCCATGTGTGCGCGCGCGCGCCAGGCGCTGGCCGCAGTGGGGCTGGACGGTTTTTCCGGCCGTCCGGTGGCCAGCCTGT
CGGTGGGCCAGTTCCAGCGCGTGCTGTTTGCCCGCATCCTGTTGCAGGATGCCGAGGTGATCCTGCTGGATGAACCGTTC
AACGCCATCGATGCCCGCACCACCGGCGACCTGCTGCGCATCATCTCGGCCTGGCATGCCGAGCGCCGCACTGTCATCGC
CGTGCTGCACGACCATGACCAGGTGCGCCGCGCCTTTCCCCAGACCCTGCTGCTGGCGCGCCACGTGGTGGCGTGGGGCC
AGACCGCCGAGGTGATGTGCGAGGAAAACCTGCAGCGCGCCCGCGCCATGGCCGAGGCCGTGGACGAGCAGGCCGGCGTG
TGCGAGGTCAGCGAAGCCGATGTGCTGGCGTTGTCGCAGTCGCATGATCACGTCCATGCTCATCTCCATGCCCATGAGCC
CACCCATGAGCACGCCCACGCTGGCAAGGGAGGCTTGCAATGA

Protein sequence : 
MNAAISLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDGRVLTHVDARRIAYLPQQAEID
RSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALAAVGLDGFSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPF
NAIDARTTGDLLRIISAWHAERRTVIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVMCEENLQRARAMAEAVDEQAGV
CEVSEADVLALSQSHDHVHAHLHAHEPTHEHAHAGKGGLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 2e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hsero_3166 YP_003776556.1 Mn2+/Zn2+ ABC transporter ATPase VFG1496 Protein 1e-36 43