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Name : czcR (Hsero_3052) Accession : YP_003776448.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : cobalt/zinc/cadmium resistance two component response regulator protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3508607 - 3509278 bp Length : 672 bp Strand : + Note : - DNA sequence : ATGGCCATCCTGGTAATCGAAGACGACCCCAAGACCGGTGACTACCTGCGCAAAGGCTTGCGCGAATCCGGCTATGCCGT GGACCTGGCCCGCAATGGCGCCGATGGCCTGCACATGGCGCTGGAACAGGACTACGACCTGGTGGTGCTGGACGTGATGC TGCCCGGGCTGGATGGCTGGCAGGTCATGAGCGCACTGCGCAGCAAGCGCGACCTGCCGGTGCTGTTCTTGACCGCGCGG GACCATGTGGACGACCGCATCCGTGGGCTGCAGCTGGGTGCGGACGATTATCTGGTCAAGCCCTTTTCCTTCACCGAGCT GGTGCTGCGCATCCGCACCCTGCTGCGCCGGGGCGTCACGCGCGAGGCCGAGGTCTACGAGATCGCCGACCTGCAGCTGG ACCATGTGCGCCACAAGGTCACCCGCCAGGGCGTCAACATCGCACTGACCAACAAGGAATTCATGCTGCTGCACCTGCTC ATCAAGCGTCAGGGCGAAGCGCTTTCGCGCAGCGTGATCGCCTCGCAGATCTGGGACATGAACTTCGACAGCGACACCAA CGTCGTCGATGTGGCCATCAAGCGCCTGCGCGCCAAGATCGATGCGCCGTTCGACAAGAAACTGATCCACACCGTGCGCA GCGTGGGCTACATGTTCTCGGAAGAACCATGA Protein sequence : MAILVIEDDPKTGDYLRKGLRESGYAVDLARNGADGLHMALEQDYDLVVLDVMLPGLDGWQVMSALRSKRDLPVLFLTAR DHVDDRIRGLQLGADDYLVKPFSFTELVLRIRTLLRRGVTREAEVYEIADLQLDHVRHKVTRQGVNIALTNKEFMLLHLL IKRQGEALSRSVIASQIWDMNFDSDTNVVDVAIKRLRAKIDAPFDKKLIHTVRSVGYMFSEEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 8e-62 | 56 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 6e-61 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | BAC0125 | Protein | 7e-69 | 62 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | BAC0197 | Protein | 3e-68 | 62 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | BAC0308 | Protein | 1e-63 | 61 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | BAC0083 | Protein | 1e-65 | 60 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | BAC0111 | Protein | 3e-65 | 58 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | BAC0638 | Protein | 7e-58 | 57 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | BAC0347 | Protein | 2e-56 | 55 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | Y16952.3.orf35.gene. | Protein | 5e-26 | 41 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | AE000516.2.gene3505. | Protein | 4e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | VFG0596 | Protein | 3e-62 | 56 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | VFG1390 | Protein | 1e-40 | 45 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | VFG1389 | Protein | 2e-36 | 45 |
| czcR | YP_003776448.1 | cobalt/zinc/cadmium resistance two component response regulator protein | VFG1386 | Protein | 4e-36 | 42 |
