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Name : Hsero_0298 (Hsero_0298) Accession : YP_003773732.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : short-chain alcohol dehydrogenase Function : - COG functional category : R : General function prediction only COG ID : COG4221 EC number : - Position : 317677 - 318423 bp Length : 747 bp Strand : + Note : - DNA sequence : ATGAGCAACAACATCAAGGACAAAGTCGTCGTCATCACCGGCGCCAGCAGCGGCCTGGGCGAAACCACCGCACGCCACCT GGCTTCCCTCGGTGCCAAGCTGGTACTGGGTGCACGCCGCACCGAGCGTCTGGAGAAGCTGGTGGCTGACATCACCGCCG CCGGTGGCCAGGCCATCGCCGTGACCACCGACGTGGCGCGCCGCGACGATGTGGAAGCCCTGGTCGCCAAAGGCGAGCAG CACTTCGGCCGCATCGACGTGCTGGTCAACAATGCCGGCATCATGCCGCTGGCTCCGATGGCCAAGCTCAAGGTCGAGGA GTGGGACCGCATGATCGACGTCAACGTCAAGGGCGTGCTCTATGGGGTCGCCGCCGCACTGCCGCGCTTTGCTGCGCAGA GCTCGGGCCACATCATCAATGTGTCGTCGGTGGCGGGCATCAAGGTCTTCGCCGGCATGGGTACCGTCTACAGCGCCACC AAGTTCGCCGTGCGCGCCCTGACCGAAGGCCTGCGCACCGAAGCACCGGACGGTGTGCGCACCACCATCATCTCCCCGGG GGCGGTGGATTCCGAACTGAAGACCCACAGCAGCGACAAGGAAACCTCGGAAGCCCTGCTGGCCTGGTATGAGGCCAACC AGATTCCGTCCGATTCGGTGGCGCGCGCCATTGCCTATGCCATCGAGCAACCGGCGAATGTGGATATCAGCGAAGTGGTG CTGCGCCCGGTGGCGCAGGAATTCTAA Protein sequence : MSNNIKDKVVVITGASSGLGETTARHLASLGAKLVLGARRTERLEKLVADITAAGGQAIAVTTDVARRDDVEALVAKGEQ HFGRIDVLVNNAGIMPLAPMAKLKVEEWDRMIDVNVKGVLYGVAAALPRFAAQSSGHIINVSSVAGIKVFAGMGTVYSAT KFAVRALTEGLRTEAPDGVRTTIISPGAVDSELKTHSSDKETSEALLAWYEANQIPSDSVARAIAYAIEQPANVDISEVV LRPVAQEF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20627.1 | hypothetical protein | Not tested | Internalin | Protein | 3e-54 | 50 |
| adh | CAI59964.1 | short-chain dehydrogenase | Not tested | LIPI-2 | Protein | 3e-46 | 45 |
