Name : lolD (Hsero_2777) Accession : YP_003776180.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Resistance Product : lipoprotein release ABC transporter ATPase Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 3171182 - 3171892 bp Length : 711 bp Strand : - Note : - DNA sequence : ATGAATGATCCCCTGAAGAACCGCCAGGCCGTGCTGGCCGCCCGTGGTCTGGGCAAGACCTTCACCCAGGGCAAGTACTC GGTGAAGGTGCTGGGTAATGTCGATATCGATGTCTATCATGGTGAGCAGGTGGCCATCGTCGGTGCTTCCGGCTCCGGCA AGTCCACGCTGCTGCATCTGCTGGGCGGGCTGGACACGCCCAGCAGCGGCACGGTCAGCCTGCTGGGCAAGGATTTCGCC AGCCTGGGCGAGAGCGAGCGCGGCGCGCTGCGCAACCAGTCGCTGGGCTTCGTCTACCAGTTCCACCATCTGCTGCCGGA ATTCTCGGCGCTGGACAACGTGGCCATGCCGCTGATGATCCGCCGCGTCAAGCGCGCCGATGCCCAGGAGCAGGCCCGCG AGATGCTGGGCAAGGTCGGCCTGGCCCAGCGCGTGACCCACGTGCCGGGAGAGCTCTCCGGCGGCGAACGCCAGCGCGTG GCGCTGGCGCGAGCGCTGGTCACGCACCCGGCCTGCGTGCTGGCCGATGAACCGACCGGCAACCTGGACCGCAGCACGGC CGATCGCACCTTCGAACTGATGATCGAACTCTCGCGCACCCTGGGCACGGCCTTTGTCATCGTCACCCACGACATTGAAC TGGCCGGTCGTTGCGGGCGCGTCCTGCGCCTGTCCGAGCAGGGTTTGCAGGCAGCTGCGCAGCAGGCCTGA Protein sequence : MNDPLKNRQAVLAARGLGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPSSGTVSLLGKDFA SLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADAQEQAREMLGKVGLAQRVTHVPGELSGGERQRV ALARALVTHPACVLADEPTGNLDRSTADRTFELMIELSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQAAAQQA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 3e-26 | 41 |
CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-26 | 41 |
cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 1e-26 | 41 |
CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-26 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
lolD | YP_003776180.1 | lipoprotein release ABC transporter ATPase | NC_008702.1.4606598. | Protein | 1e-32 | 45 |
lolD | YP_003776180.1 | lipoprotein release ABC transporter ATPase | NC_012469.1.7686878. | Protein | 8e-38 | 41 |