|
Name : coxA (Hsero_2311) Accession : YP_003775718.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : cytochrome c oxidase polypeptide I transmembrane protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 2612279 - 2614180 bp Length : 1902 bp Strand : - Note : - DNA sequence : ATGACCCCGGACCCACGCGCCGAAGAAGCGCGCCGCCTGGAACAGACCTGGTCGGACCCGCCCGGACTATGGGGCTGGCT TTGCGCGGTCAACCACAAGGCCATTGCGCGCCGCTTCATGGTGACCACCTTCGTGTTCTTCCTGCTGGGCGGCATGCTGG CGCTGGCCATGCGGCTGCAACTGGCGCGCCCCGACGCTGAGCTGATCGGCGCAAGGCTCTACAACCAGCTCTTCACCATG CATGGCACGACCATGATGTTCCTCTTTGCCGTGCCGGTGATGCAGGCCGTGGCGGCCTATCTGCTGCCGCTCATGATCGG CGCGCGCAGTGTCGCTTTCCCGCGCCTGAACGCCTTTGCCTACTGGATCTTCCTCTTTGGCGGACTGCTGCTGTATGGCG CCTTCTTGGCCGGCAGCGGGCCGGACGTGGGCTGGTTCGCCTACGTGCCACTGGCCTTGAATCCCTATGCCTCGGGCAAG GGCGTGGATATCTGGGCGCAGATGATCACCTTTACCGAGCTCTCGGCCCTGATCGAGGCCATCGTCATCATTACCACGGT GATGAAGCTGCGCGCGCCCGGCATGAGCCTGCGCCGCATGCCGCTGTTCGCCTGGGCCATGCTGGTGACCTCGGTGATGG TGCTCTTCGCCATGCCGGCGGTGATGCTGGCCAGCACCGGACTCATCACCGACAGGCTGGTCAACACCCAGTTCTACAGC CACCAGAACGGCGGCGATGCGTTGCTGTGGCAGCACCTGTTCTGGTTCTTTGGGCATCCGGAGGTCTATCTCATCTTCCT GCCGCCGCTGGGGATGATCTCGACCATCATTCCCACCTTCGCGCGTCGCTCCATGGTGGGCTATCCGGCCATGGTGCTGG CCCTGATCGCCACAGCCTTCCTCGCCTTCGGCCTATGGGTGCATCACATGTTCGCCACCACCCTGCCCGAGGCCGGCAAG CTCTTCTTCACCGCGGCCAGCCTGCTCATCGCCCTGCCCACGGCCTTGCAGATCTTTTGCTGGATCAGCACGATCTGGCT GGGACGGCCGGTGTTCAAGACGCCTTTGCTGTTCGTGCTGGCCTTCTTCTTCATCCTGGTCATGGGCGGCCTGACCGGGC TGATGCTGGCCTCGGTGCCGCTGGACCTGCAATTGCACGACACCTATTTCGTGGTCGCGCACCTGCACTACGTGCTGCTG GGTGGGGCCATCTTTCCGCTCTTCGGCGGTTTCTACTACTGGTTCCCCAAGTTCACCGGGCGCATGCTGGACGAGCGGCT GGGGCGCTGGAATTTCTGGCTGTTCTTCGTCGGTTTCAACGTCTGCTTCTTCCCCATGCATGTGCTGGGCCTGCAGGGCA TGACGCGGCGGGTCTATACCTACGCGGCGCAGATGGGCTGGGAGGGCCTGAACCTGACGGCCACCATCGGCGCTTTCCTG ATCGGCCTGAGCGTGCTGCTATTCCTGCTCAACGTGGTGCACAGCCTGTGGCGGGGTGCCGCGGCGGGCGACAATCCCTG GGGCGCGGCTACGCTGGAATGGAGCCTGCCTTCGCCGCCGCCGGCGGGCAATTTCCTGGAGGTGCCGGTGGTGCATGCGG CTGACCCGCTGTGGCAAGCGCCGCGCCTGCCCAGCCATGTCAGCGGGCTGGACAATGGCCAGCGCGAAGTGCTCATCACC AGCGTCATCGAGGCCCATCCGCAACATCGCTTCTGGTTGCCCACGCCCTCGCCCTGGCCGCTCTTGTCGGCGCTGGCGAC CACGGCGCTGTTCATCGGCTCCATCTTCAGTCCCTGGGCGGTGGTGTGGGGCGCCTTGCCCGTTGGCCTGGCCACGGCGA TCTGGTTCTGGCCGCGCCGCCAGCGCAGCCAGGCGCGCATCGCCAGCGAGGTGCGGCCATGA Protein sequence : MTPDPRAEEARRLEQTWSDPPGLWGWLCAVNHKAIARRFMVTTFVFFLLGGMLALAMRLQLARPDAELIGARLYNQLFTM HGTTMMFLFAVPVMQAVAAYLLPLMIGARSVAFPRLNAFAYWIFLFGGLLLYGAFLAGSGPDVGWFAYVPLALNPYASGK GVDIWAQMITFTELSALIEAIVIITTVMKLRAPGMSLRRMPLFAWAMLVTSVMVLFAMPAVMLASTGLITDRLVNTQFYS HQNGGDALLWQHLFWFFGHPEVYLIFLPPLGMISTIIPTFARRSMVGYPAMVLALIATAFLAFGLWVHHMFATTLPEAGK LFFTAASLLIALPTALQIFCWISTIWLGRPVFKTPLLFVLAFFFILVMGGLTGLMLASVPLDLQLHDTYFVVAHLHYVLL GGAIFPLFGGFYYWFPKFTGRMLDERLGRWNFWLFFVGFNVCFFPMHVLGLQGMTRRVYTYAAQMGWEGLNLTATIGAFL IGLSVLLFLLNVVHSLWRGAAAGDNPWGAATLEWSLPSPPPAGNFLEVPVVHAADPLWQAPRLPSHVSGLDNGQREVLIT SVIEAHPQHRFWLPTPSPWPLLSALATTALFIGSIFSPWAVVWGALPVGLATAIWFWPRRQRSQARIASEVRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 3e-83 | 41 |
