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Name : smpB (Hsero_2202) Accession : YP_003775609.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : tmRNA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 2481037 - 2481486 bp Length : 450 bp Strand : - Note : - DNA sequence : ATGAGCATTATTGATAACAAAAAGGCCTTTTTCGATTACTTCATCGAAGAGCGATTCGAAGCCGGCCTCGTCTTGCAAGG TTGGGAAGTCAAGTCGATCCGCGCTGGCCGCGTGCAATTGAAGGAAGCCTATGTGATCGTGCGCAATGGCGAAGTCTATC TGTTCGGCTGCCACATCAGTGCGCTGACCAGCACCTCCACGCACGTCCACCCCGAAACCACCCGCACCCGCAAGCTGCTC CTGAATGCTGCCGAAATCAGCAAGCTGATCGGCAAGGTCGAGCGCTCCGGCTATACGCTGGTGCCGCTGAACCTGCATTA CAACAAGGGCCGCATCAAGTGCGATATCGGTCTGGCCAAGGGCAAGAAACAGCACGACAAGCGCGAGACCGAAAAGCAGC GCGACAGCCAGCGCGAGATCCAGACGGCGATGAAGCAGCATCGCCGCTGA Protein sequence : MSIIDNKKAFFDYFIEERFEAGLVLQGWEVKSIRAGRVQLKEAYVIVRNGEVYLFGCHISALTSTSTHVHPETTRTRKLL LNAAEISKLIGKVERSGYTLVPLNLHYNKGRIKCDIGLAKGKKQHDKRETEKQRDSQREIQTAMKQHRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 8e-32 | 48 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 5e-22 | 45 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-22 | 43 |
