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Name : aspC (Hsero_2093) Accession : YP_003775501.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : aspartate aminotransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0436 EC number : 2.6.1.1 Position : 2352231 - 2353460 bp Length : 1230 bp Strand : + Note : - DNA sequence : GTGCGACCGATTCAGAAATCCAAGAAACTGGCAGATGTGTGCTACGACATTCGGGGTCCCGTGCTGGAGAAGGCGCGCCA GATGGAGGAAGAGGGCCACAAGATCATCAAGCTCAACATCGGCAACCTGGCCGCCTTCGGCTTCGACGCGCCCGACGAGA TCGTGCAGGACATGATCCGCAACATGGGCAACGCCTCCGGCTACACCGATTCCAAGGGCCTGTTCGCCCCGCGCAAGTCG GTCATGCATTACACCCAGCAGAAGAAGATCGAGGGTGTCACCATCGATGACATCTACCTGGGCAATGGCGCCTCCGAACT GATCGTCATGAGCGTGAATGCGCTGCTCAACACCGGTGACGAAGTGCTGGTCCCTTCGCCCGACTATCCGCTGTGGACCG CCGCCGTGAGCCTGTCCGGCGGCACCCCGGTGCATTATGTCTGCGACGAGCAGCAAGGCTGGCAGCCCGACATCGCCGAC ATCAAGAAGAAGATCACTCCCAACACCAAGGCCATCGTCGTCATCAACCCCAACAACCCCACCGGGGCGCTGTATTCGGT GGAGGTGTTGAAGGAAATCATCGAGCTGGCGCGCCAGCACCAGCTGATCATCCTGGCCGACGAGATCTACGACAAGGTGC TCTACGACGGCAACACCCACACCTCGCTGGCTTCGCTGGCCGACGATGTGCTGTTCATCACCTTCAACGGCCTGTCCAAG AACTATCGTTCCTGCGGCTACCGCGCCGGCTGGATGGTGGTCTCGGGCGAGAAGAAGCATGCCCGCGACTACATCGAGGG CCTCAACATGCTGGCCTCGATGCGCCTGTGCGCCAATGCACCCGGCCAGTTCGCCATCCAGACCGCGCTGGGCGGCTACC AGAGCATCAACGATCTGGTCGGCCCGCAAGGCCGCCTGACCAAGCAACGTGACCTGGCCCATCAGCTGCTGACCGATATT CCGGGCGTGAGCTGCGTCAAGCCCAAGTCGGCGCTGTACATGTTCCCGCGCCTGGATCCGGAGATCTATCCGATCAAGGA CGACCAGGAATTCGCCTACGAGCTGCTGGCCGAGGAAAAGGTGCTGATCGTCCAGGGCACGGGCTTCAACTGCCCCACGC CGGACCACTTCCGTGTGGTGTTCCTGCCCAATACCGACGACCTGACCGAGTCCATGGGCCGCATCGCGCATTTCCTGGAA GGCTATCGCCGCCGCCACGGCACGGCCTGA Protein sequence : MRPIQKSKKLADVCYDIRGPVLEKARQMEEEGHKIIKLNIGNLAAFGFDAPDEIVQDMIRNMGNASGYTDSKGLFAPRKS VMHYTQQKKIEGVTIDDIYLGNGASELIVMSVNALLNTGDEVLVPSPDYPLWTAAVSLSGGTPVHYVCDEQQGWQPDIAD IKKKITPNTKAIVVINPNNPTGALYSVEVLKEIIELARQHQLIILADEIYDKVLYDGNTHTSLASLADDVLFITFNGLSK NYRSCGYRAGWMVVSGEKKHARDYIEGLNMLASMRLCANAPGQFAIQTALGGYQSINDLVGPQGRLTKQRDLAHQLLTDI PGVSCVKPKSALYMFPRLDPEIYPIKDDQEFAYELLAEEKVLIVQGTGFNCPTPDHFRVVFLPNTDDLTESMGRIAHFLE GYRRRHGTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aspC | YP_005682179.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 3e-119 | 57 |
| aspC | YP_005684271.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 3e-119 | 57 |
| aspC | YP_003784329.1 | aspartate aminotransferase | Not tested | PiCp 7 | Protein | 3e-119 | 57 |
| aspC | YP_005686363.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 3e-119 | 57 |
