Gene Information

Name : fliP (Hsero_2049)
Accession : YP_003775457.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2314327 - 2315061 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence : 
CTGCGCAACCGTTACTGCTGGCTGGCGCTGCTGTGCCTGCCCTTGGCAGCCTCGGCCCAGCAGGGTATTCCCGCACTCAA
CAGCATGCCCGCTCCGGGCGGCGGCACGAACTATTCGCTGCCGATCCAGACGATGCTGTTGCTCACCTCGCTGTCCTTCC
TGCCGGCGGCCTTGCTGATGATGACCTGCTTCACCCGCATCGTCATCGTGCTCTCGCTGCTGCGCCAGGCGCTGGGCACC
CAGTCGACCCCGCCCACGCAGGTGCTGGTGGGGCTGTCGCTGTTCCTGACCTTCTTCGTCATGAGCCCGGTGTTCGACCG
CATCTATACCGACGCCTACCAGCCCTTCGCGGAAAACAAGATCCAGATGATGGAAGCGCTCGACAAGGGCGCGCAGCCGC
TCAAGGAATTCATGCTCAAGCAGACCCGCGAGTCGGACCTGGCGCTGTATGTGAAGCTCTCGCGCGGTCCCGCCCTGCAG
GGCCCGGAAGACGTGCCGCTACGCCTCCTGGTGCCAGCCTTCGTCACCAGCGAACTGAAGACGGCGTTCCAGATCGGCTT
TGCCATCTTCCTGCCCTTCCTCATCATCGACATGGTGGTGGCCAGTATCCTCATGTCCATGGGCATGATGATGATGTCGC
CAGCGCTGGTGTCGCTGCCCTTCAAGCTGATGCTGTTCGTGCTGGTGGACGGCTGGCAGCTGCTCATCGGGTCGCTGGCC
CAGAGTTTTTACTAG

Protein sequence : 
MRNRYCWLALLCLPLAASAQQGIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFLPAALLMMTCFTRIVIVLSLLRQALGT
QSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQPFAENKIQMMEALDKGAQPLKEFMLKQTRESDLALYVKLSRGPALQ
GPEDVPLRLLVPAFVTSELKTAFQIGFAIFLPFLIIDMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQLLIGSLA
QSFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 4e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_003775457.1 flagellar biosynthetic protein FliP VFG2494 Protein 4e-77 78
fliP YP_003775457.1 flagellar biosynthetic protein FliP VFG2338 Protein 1e-73 71
fliP YP_003775457.1 flagellar biosynthetic protein FliP VFG1259 Protein 6e-62 62
fliP YP_003775457.1 flagellar biosynthetic protein FliP VFG2016 Protein 2e-55 53