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Name : serS (Hsero_1910) Accession : YP_003775327.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2168302 - 2169603 bp Length : 1302 bp Strand : + Note : - DNA sequence : ATGATCGACATCCAACTCCTCCGTAAAGACATCGAGAACGTCGCGGCCCGCCTGGCGGCCCGCAAGTTCGTCCTGGACGT GGCCGGCTTCAATGCGCTCGAAGCCGAGCGCAAGCAGATCCAGACCCGTACCGAAGAACTGCAGGGCAAGCGCAACAGCC TGTCCAAGCAGATCGGCATGCTCAAGGGCAAGTGCGAAGACGCTTCCGCAGTGATGGCCGAGGTCAACGGCATCGGCGAC GAGTTGAAGGCTTCGGCCACCCGTCTGGAAGAAGTGCAGCAACAGATGAACCTGTTCCTGCAGGCGGTACCCAATCTGCC GCACGAATCGGTGCCGGTGGGCAATGACGAGAGCGGCAACGTCGAGCTGCGCAAGGTCGGCACGCCGCGCCAGTTCGACT TCGAGATCAAGGATCACGTCGATGTCGGCGCTGCGCTGGGCCTGGACTTCGATACCGCCACCAAGCTGACCGGTTCGCGC TTTGCCGTGCTCAAGGGCGGCATCGCCCGCCTGCACCGTGCGCTGGCGCAATTCATGCTGAACACGCACACGATGGAGCA TGGCTATACCGAGTGCTACACCCCCTACATCGTCAACGCCGACAGCCTGCGCGGCACCGGTCAGCTGCCCAAGTTCGAGG CCGACCTGTTCGCGGCCAAGAAGGGCGGCCAGGAAGGCGAGGCCGAGAATGCCGCGCTGTACCTGATCCCCACGGCGGAA GTGCCGCTGACCAATTTCGTGCGTGACGAGATCGTGGCCGGCGATGCCTTGCCGATGAAGTTCACCGCCCATTCGCCTTG CTTCCGCTCGGAAGCCGGTTCCTACGGCCGTGATACCCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTGGAAATGG TGCAGATCGTCCATCCGGAGCAGTCCTATGACGCCCTGGACGAGATGCTGGGCCACGCCGAGACCATCCTCAAGAAGCTC GGCCTGCCGTACCGCGTGATCACCCTGTGCACCGGCGACATGGGCTTTGGTGCGGCCAAGACCTATGACATCGAAGTCTG GCTGCCGGCGCAGAAAACCTATCGCGAGATCTCTTCGGTCTCCAACTGCGAAGCCTTCCAGGCGCGTCGCATGCAGGCGC GTTTCCGCAATGCCCAGGGCAAGCCGGAACTGCTGCATACGCTCAATGGTTCGGGCCTGGCCGTGGGCCGCACCCTGGTG GCCGTGCTGGAAAACTACCAGCAGGCCGATGGCAGCGTGGACATCCCCGAGGCCCTGCAGCCCTACATGGGTGGAGTAAC CCGGCTCGTGCCGGGCGCATAA Protein sequence : MIDIQLLRKDIENVAARLAARKFVLDVAGFNALEAERKQIQTRTEELQGKRNSLSKQIGMLKGKCEDASAVMAEVNGIGD ELKASATRLEEVQQQMNLFLQAVPNLPHESVPVGNDESGNVELRKVGTPRQFDFEIKDHVDVGAALGLDFDTATKLTGSR FAVLKGGIARLHRALAQFMLNTHTMEHGYTECYTPYIVNADSLRGTGQLPKFEADLFAAKKGGQEGEAENAALYLIPTAE VPLTNFVRDEIVAGDALPMKFTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPEQSYDALDEMLGHAETILKKL GLPYRVITLCTGDMGFGAAKTYDIEVWLPAQKTYREISSVSNCEAFQARRMQARFRNAQGKPELLHTLNGSGLAVGRTLV AVLENYQQADGSVDIPEALQPYMGGVTRLVPGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-98 | 53 |
