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Name : exaC (Hsero_1896) Accession : YP_003775313.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : NAD+ dependent acetaldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.10 Position : 2152739 - 2154259 bp Length : 1521 bp Strand : + Note : - DNA sequence : ATGAACCTGGCAGACATCAGCAAACTCGGCGTACGCGACCCCTTCAAGCAACGTTACGACAATTTCATCGGTGGCAAATT CGTGCCGCCGGTCAAGGGTGAATACTTCGAGAACATCAGCCCGGTGATCGGACGCGCCTTCTGTGAAGTGGCCCGCTCCA GCGCCGAAGACGTGGAGCTGGCGCTGGACGCCGCCCACGCAGCCAAGAAGAGCTGGGGCAAGACCTCCCCCACCGAGCGC GCCAATATGCTGTTGAAGATCGCCGACCGCATGGAAGCCAACCTGGAGCTGCTGGCCACTGCCGAAACCCTGGACAACGG CAAGCCCATCCGCGAGACCATGGCCGCCGACATCCCGCTGGCCATCGACCACTTCCGCTATTTCGCCGCTGCCGTGCGCA CCCAGGAAGGCAGCATCTGCCCCATCGACAATGACACCTACGCCTACCACTTCCATGAGCCTCTGGGCGTGGTCGGCCAG ATCATCCCCTGGAACTTCCCCATCCTGATGGCGGTGTGGAAACTGGCCCCGGCGCTGGCCGCCGGCAATTGCGTGGTGTT AAAGCCCGCCGAGCAGACCCCGGCCTCCATCATGGTGCTGATCGAACTGATCGCCGACCTGATCCCGCCGGGCGTGGTCA ACATCGTGCAGGGCTTTGGCGTGGAAGCCGGCAAGCCGCTGGCCTCCAACAAGCGTATCGCCAAGATCGCCTTCACTGGC GAGACCACCACTGGCCGCCTGATCATGCAATACGCTTCGCAGAACCTGATCCCGGTGACGCTGGAGCTGGGCGGCAAGTC GCCCAATATCTTCTTCGCCGACGTGCTGGACAAGGATGACGACTTCTTCGACAAGGCCCTGGAAGGCTTTGCCATGTTCG CGCTGAACCAGGGCGAGGTCTGCACCTGCCCCTCGCGCGTGCTGGTGCAGGAATCGATCTACGAGCGCTTCATCGAGCGC GCCTTGAAGCGCGTGGCGGCCATCAAGCAGGGCAATCCGCTGGACAAGAGCACCATGATCGGCGCGCAGGCCTCGCAGGA ACAGCTGGAAAAGATCCTGTCCTACATCGACATCGGCAAGCAGGAAGGCGCCAAGGTGCTGGCCGGCGGCGGGCGCGAAG AACTGGGCGGCGACCTGGCCTCGGGCTACTACGTCAAGCCGACCGTGTTCCAGGGCAATAACAAGATGCGCATCTTCCAG GAAGAAATCTTTGGCCCGGTGGTCTCGGTGACCACCTTCAAGGATGAAGAAGAAGCGCTGGCCATTGCCAATGACACGCT GTACGGCCTGGGCGCGGGCCTGTGGACCCGGGATGGCACGCGCGCCTTCCGCATGGGGCGTGAGATCCAGGCTGGCCGTG TCTGGACCAACTGCTATCACCTCTATCCGGCGCATGCGGCCTTCGGCGGCTACAAGCAATCCGGCATCGGCCGCGAAAAC CACAAGATGATGCTGGACCACTACCAGCAGACCAAGAACCTGCTGGTCAGCTACAGCCCGAAGGCGCTGGGCTTCTTCTG A Protein sequence : MNLADISKLGVRDPFKQRYDNFIGGKFVPPVKGEYFENISPVIGRAFCEVARSSAEDVELALDAAHAAKKSWGKTSPTER ANMLLKIADRMEANLELLATAETLDNGKPIRETMAADIPLAIDHFRYFAAAVRTQEGSICPIDNDTYAYHFHEPLGVVGQ IIPWNFPILMAVWKLAPALAAGNCVVLKPAEQTPASIMVLIELIADLIPPGVVNIVQGFGVEAGKPLASNKRIAKIAFTG ETTTGRLIMQYASQNLIPVTLELGGKSPNIFFADVLDKDDDFFDKALEGFAMFALNQGEVCTCPSRVLVQESIYERFIER ALKRVAAIKQGNPLDKSTMIGAQASQEQLEKILSYIDIGKQEGAKVLAGGGREELGGDLASGYYVKPTVFQGNNKMRIFQ EEIFGPVVSVTTFKDEEEALAIANDTLYGLGAGLWTRDGTRAFRMGREIQAGRVWTNCYHLYPAHAAFGGYKQSGIGREN HKMMLDHYQQTKNLLVSYSPKALGFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-142 | 65 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-147 | 65 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-147 | 65 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-147 | 65 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-146 | 65 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 3e-69 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| exaC | YP_003775313.1 | NAD+ dependent acetaldehyde dehydrogenase | VFG0082 | Protein | 6e-143 | 65 |
