|
Name : Hsero_1842 (Hsero_1842) Accession : YP_003775260.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : ABC transporter ATPase Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 2091189 - 2093042 bp Length : 1854 bp Strand : + Note : - DNA sequence : ATGCAACAGCCACAACGCGTGCTGGACGTGAATCACCTGAGCGTGCGATTTTCCACCTCCGAGCGGACCGTGGATGCGGT GCGCGACCTGTCCTTCCATGTCGACCAGGGCGAAACCCTGGCCATCGTCGGTGAATCGGGGTCGGGCAAGTCGGTGTCGT CGCTGGCCATCATGCGCCTGATCGAACATGGCGGCGGCAAGATCGCCAGCGGCAGCATGCAGTTCCTGCGCCGCAGCGGC CAGAGGCTGGACCTGGCCCAGGCTGACAACGCCACCATGCGCAGCATCCGCGGGGCGGAGATCGCCATGATCTTCCAGGA GCCGATGACCTCGCTGAACCCGGTCTTTACCGTCGGCGAGCAGATCGCCGAATCGATCCGCCTGCACCAGGGGCTGGGAC GCGCCGCTGCCCAGGCCGAGGCCCTGCGCATGCTGGAGATGGTGCGCATCCCCGAAGCCAAACGGGTGCTGGGCCGCCAT CCGCACCAGCTCTCCGGCGGCATGCGCCAGCGCGTGATGATCGCCATGGCGCTGTCCTGCAAGCCCTCGCTGCTGATCGC GGACGAACCGACCACGGCGCTGGATGTGACCATCCAGGCGCAGATCCTGCAACTGATCCGTTCGCTGCAGCAGGAGATGC AGATGGGCGTGATCTTCATCACCCACGACATGGGCGTGGTGGCCGAAGTGGCCGACCGCGTGGTGGTGATGTGCCGGGGC GAGAAGGTGGAAGAGAACGCCGTCAATCCGCTCTTCGCCGCACCGGCCCATCCCTACACCCAATCGCTGCTGGCCGCGGT GCCGCGCCTGGGTTCCATGCGCGGCACCGACAAGCCGCTGCGCTTTGGCATCGCGCCCCAGGCCGAGGCGCGTCCCGACC TGATCGCCAGTGAATTGCAGGCCCAGGCCGAGATCGCCGCGCAACGCCAGCCCATCCTCAAGGTGCGCGACCTGACCACC CGCTTCGATGTGAAGAGCGGGATCTTCGGTCGCGTCAGGCAGCGCGTGCATGCGGTGGAAAAGGTCAGCTTCGATCTGTA TGCCGGCGAGACCCTGGCCATCGTCGGCGAATCCGGTTGCGGCAAGTCGACCACGGGCCGCTCGCTGCTGCGCCTGGTCG ATATCGCCGGCGGCAAGGTCGAGTTCGGCGGGCGCGACCTGGCGCAGTTGCCGCGTTCGGAACTGCGCCAGCTGCGCCGC GACATCCAGTTCATCTTCCAGGACCCGTTCGCCTCGCTGGACCCGCGCATGACGGTCGGCTATTCCATCATGGAGCCCAT GCTGGTGCATGGGATGAAGGAGGGCGCGCAGGAACGCGTGGATGCGCTGCTGACCCGCGTGGGCTTGACGCCCGAGCATG GCCAGCGCTATCCGCACGAATTCTCTGGCGGCCAGCGCCAGCGTATCTGCATTGCGCGCGCCTTGGCGCTGAACCCCAAG ATCGTCATTGCCGATGAATCGGTGTCGGCGCTGGATGTGTCGATCCAGGCCCAGATCGTCAACCTGATGCTGGACCTGCA GGCCGAGCTGGGCATCTCCTTCATCTTCATTTCGCACGACATGGCGGTGGTGGAGCGCATCAGCCATCGGGTGGCGGTGA TGTACCTGGGCCAGATCGTGGAAATCGGCCCGCGCCGGGCGATCTTCGAGAATCCGCAGCATCCCTATACGCGCAAGCTC ATGGCGGCTGTGCCGGTGGCTGATCCGACCCTGCGCCAGCCGGGCAAGAAGCTGCTGACCGATGAAATCCCCAGCCCGAT CCGGCGGGTGGGCGACGAGCCCAAGGTGGAACCCTTGCAGGAAGTGGCGCCTGGGCATTTCGTGGCCCAGCACCGTATTG CCGGCGCTTTCTGA Protein sequence : MQQPQRVLDVNHLSVRFSTSERTVDAVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRLIEHGGGKIASGSMQFLRRSG QRLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIAESIRLHQGLGRAAAQAEALRMLEMVRIPEAKRVLGRH PHQLSGGMRQRVMIAMALSCKPSLLIADEPTTALDVTIQAQILQLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRG EKVEENAVNPLFAAPAHPYTQSLLAAVPRLGSMRGTDKPLRFGIAPQAEARPDLIASELQAQAEIAAQRQPILKVRDLTT RFDVKSGIFGRVRQRVHAVEKVSFDLYAGETLAIVGESGCGKSTTGRSLLRLVDIAGGKVEFGGRDLAQLPRSELRQLRR DIQFIFQDPFASLDPRMTVGYSIMEPMLVHGMKEGAQERVDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNPK IVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIVEIGPRRAIFENPQHPYTRKL MAAVPVADPTLRQPGKKLLTDEIPSPIRRVGDEPKVEPLQEVAPGHFVAQHRIAGAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-91 | 41 |
