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Name : nlpA (Hsero_1794) Accession : YP_003775212.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : metal ion ABC transporter periplasmic protein/surface antigen protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 2025165 - 2025989 bp Length : 825 bp Strand : + Note : - DNA sequence : ATGCATTTCGCTTCCTGCTTCAAGAATATCAAGCGCCTTGCCGCCATCGGCGCGCTGTCTCTGGCCCTGGTCCCGCAGCT TGGACAGGCGCAGGACAAGCAGAAGATCAAGGTCGGCATCTCGGTCGGCAGCGCCGAAGCCATCTTCGACGTCGTCAAGA AGGTGGCCGCCCGCGACGGCCTGGAGATCCAGACCGTGGTCTTCAGCGACTACCTGCAGCCCAATGCCGCGCTGGCGGCA GGCGACCTCGACGCCAACGCCTTCCAGCACCGTCCATATCTGGAAAGCCAGATCGCCGCGCGCGGCTATCGCATCGTGCC GGTCGGACTGACCATCACTGCGCCGCTGGGCATTTATTCGCGCAAGTTCCGTTCGGTCGAACAGCTGCCGCAGGGTGCCG CCATCGGCATCCAGAATGATCCCTCCAATGGCAATCGCGCCCTGCTGCTGTTGCAGAAAGCCGGCCTGATTCGGCTCAAG CCCGGAGTAGGCGAGAATGGCGTGAACGCGACGCCGCTGGACGTGATCGAGAATCCGCGCAAGCTCAAGCTGGTGGAACT GGACGCGGCGCAGCTGCCGCGTTCGCTGGATGATCTGGCGGCCGCATCGATCAACAATGACTATGCCTTCAAGGCTGGCC TGTCTCTGCAGAAAGACACCATTGCCGTGGAAGACCCGCGCGGGCGTTATGCCAACATCATCGCCACCCGCGCCGAAGAC AAGGATCGCCCCTGGGTCCGTAAGCTAGTGCAGGCCTACCACTCCGAGGAGGTGCGCAAGTTCATCGAGACCGAGTTCAA GGGCTCGCTGGTGCCAGCCTTCTGA Protein sequence : MHFASCFKNIKRLAAIGALSLALVPQLGQAQDKQKIKVGISVGSAEAIFDVVKKVAARDGLEIQTVVFSDYLQPNAALAA GDLDANAFQHRPYLESQIAARGYRIVPVGLTITAPLGIYSRKFRSVEQLPQGAAIGIQNDPSNGNRALLLLQKAGLIRLK PGVGENGVNATPLDVIENPRKLKLVELDAAQLPRSLDDLAAASINNDYAFKAGLSLQKDTIAVEDPRGRYANIIATRAED KDRPWVRKLVQAYHSEEVRKFIETEFKGSLVPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nlpA | AAW51766.1 | NlpA | Not tested | AGI-3 | Protein | 9e-43 | 45 |
