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Name : Hsero_1558 (Hsero_1558) Accession : YP_003774979.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : metal ion ABC transporter periplasmic protein/surface antigen protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 1792859 - 1793650 bp Length : 792 bp Strand : - Note : - DNA sequence : ATGATCCGCAAACTGATCCCTCACCTCTTCGCTGGCGCCGCCCTGGCCTTCTCCGTGGGCGCGCACGCTGCCGACAAGCT GGTCATCGCCGCCACCCCGGTGCCGCATGCCGAGATCCTGGAACACATCAAGCCGGCCCTGGCCAAGGAAGGCATCGACC TGCAGGTGAAGGTCTTCACCGACTACGTGCAGCCGGCCGCGCAGACCAACGAGAAACAGGTGGACGGTAACTTCTTCCTG CACCAACCCTACCTGGACCAGTTCAAGAAGAGCCACAAGAACGATATCGAAGTACCGGTCGCCAAGGTCCACGTCGAGCC CTTCGCCGCCTACTCGCAGAAGTACAAGAAGATCGCTGACATCCCCAATGGCGCCACCATCGCCATCCCCAACGATCCGT CCAACTCGGGCCGCGCCCTGCTGCTGCTGGCCCGCAACGGCCTCATCAAGCTCAAGGACAACACCAACATCTCCGCGACC CAGAAGGACATCGTCGAGAACCCCAAGAAGCTGAAGTTCCGCGCCCTGGAAGCGGCTACCCTGCCGCGCGTGCTGAACCA GGTCGATGTCGCCCTGATCAACACCAACTATGCGCTGGAAGCCAAGCTGAACCCGGTCAAGGATTCGCTGTTCATCGAAG ACGCCAATTCGCCCTACGCCAACCTGCTGGTGGCGCGCGAAGACAACAAGGACAGCCCGGCCATCAAGAAGCTGGCCGCT GCCCTGAACTCGCCGGACGTGAAGAAGTTCATCGAAGAGAAGTACCAGGGCGCTATCGTCCCGGCCTTTTGA Protein sequence : MIRKLIPHLFAGAALAFSVGAHAADKLVIAATPVPHAEILEHIKPALAKEGIDLQVKVFTDYVQPAAQTNEKQVDGNFFL HQPYLDQFKKSHKNDIEVPVAKVHVEPFAAYSQKYKKIADIPNGATIAIPNDPSNSGRALLLLARNGLIKLKDNTNISAT QKDIVENPKKLKFRALEAATLPRVLNQVDVALINTNYALEAKLNPVKDSLFIEDANSPYANLLVAREDNKDSPAIKKLAA ALNSPDVKKFIEEKYQGAIVPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nlpA | AAW51766.1 | NlpA | Not tested | AGI-3 | Protein | 2e-33 | 46 |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 3e-37 | 42 |
