|
Name : rplS (Hsero_1509) Accession : YP_003774932.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1731532 - 1731915 bp Length : 384 bp Strand : + Note : - DNA sequence : ATGGATCTGATCCAGCAACTCGAGCAAGAAGAGATCGCGCGTCTCGCCAAGAACATTCCCGACTTCGCCCCCGGCGACAC CGTGATTGTCAACGTGAACGTGGTTGAAGGTACCCGCAAGCGCGCCCAGGCCTACGAAGGCGTGGTCATCGCCCGTCGTA ACCGTGGTCTGAATTCCAACTTCATCGTCCGCAAGATTTCTTCGGGTGAAGGCGTGGAGCGTACCTTCCAGCTGTACTCG CCGCTGATCGCCTCGATCGAAGTCAAGCGTCGTGGTGACGTGCGTCGTGCCAAGCTGTACTACCTGCGCGAACGTTCGGG CAAGTCGGCACGTATCAAGGAAAAGCTGCCCAGCCGTGCGGCAAAGGCTGCTGCTGCCGAGTAA Protein sequence : MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYS PLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRAAKAAAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 4e-33 | 67 |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 6e-26 | 58 |
