|
Name : czcR (Hsero_0015) Accession : YP_003773453.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : response regulator for cobalt/zinc/cadmium resistance transcription regulator protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 23342 - 24049 bp Length : 708 bp Strand : + Note : - DNA sequence : ATGCATATCTTGTTGGTAGAGGACGAACCCAAGTCTGGCGACTACCTGCGCCGTGGCTTGACCGAGTCCGGCTTTGTGGT GGACTGGGTGCAGACCGGGGTCGATGGCCTGCATAATGCGCGCACGCTGGACTACAAGCTCATCATCCTGGATGTGATGC TGCCCGGCATGAATGGCTGGGACATCCTGCGCGAACTGCGCCGCACGCATGACACGCCCGTGCTGTTCCTGACCGCGCGC GACGAGGTGGAAGACCGCGTCAAGGGTCTGGAGCTGGGCGCAGACGATTACCTGGTCAAGCCCTTCGCCTACACCGAACT GCTGGCGCGGGTGCGCACCCTGCTGCGCCGTGGTCCCAGCCGCGAAGTCGATCTGATCGAATACGACGATGTGGTGCTCG ATGTCCTGCGCCGCAAAGTGACCCGCGCAGGACAACGCATCGACCTCACCGCCAAGGAATTCGCGCTGCTGCACATGTTG ATCCGCCGCCCCGGCGAAGTGCTCTCGCGTCCGCAGATCGCCTCCCAGGTCTGGGACATGAACTTCGACAGCGACACCAA CGTGGTCGACGTCGCCGTGCGTCGCCTGCGCGCCAAGCTCGATGAGGGTTTCGAGAAGAAGCTGCTGCATACGGTCTGGG GCATGGGCTACGTGTTCGAGGTGCGGGAGGGGCGCGAGGTGCGTGAGGTGCGTGAGGAGCGCCCATGA Protein sequence : MHILLVEDEPKSGDYLRRGLTESGFVVDWVQTGVDGLHNARTLDYKLIILDVMLPGMNGWDILRELRRTHDTPVLFLTAR DEVEDRVKGLELGADDYLVKPFAYTELLARVRTLLRRGPSREVDLIEYDDVVLDVLRRKVTRAGQRIDLTAKEFALLHML IRRPGEVLSRPQIASQVWDMNFDSDTNVVDVAVRRLRAKLDEGFEKKLLHTVWGMGYVFEVREGREVREVREERP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 2e-54 | 57 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 3e-53 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | BAC0197 | Protein | 8e-69 | 68 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | BAC0083 | Protein | 4e-64 | 65 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | BAC0638 | Protein | 2e-55 | 63 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | BAC0111 | Protein | 8e-61 | 62 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | BAC0125 | Protein | 9e-65 | 62 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | BAC0308 | Protein | 3e-59 | 59 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | BAC0347 | Protein | 1e-53 | 57 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | NC_010079.5776364.p0 | Protein | 1e-38 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | NC_002952.2859858.p0 | Protein | 1e-38 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | NC_007622.3794948.p0 | Protein | 1e-38 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | AE015929.1.gene1106. | Protein | 9e-34 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | NC_003923.1003417.p0 | Protein | 1e-38 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | NC_013450.8614146.p0 | Protein | 1e-38 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | NC_002951.3238224.p0 | Protein | 1e-38 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | NC_007793.3914065.p0 | Protein | 1e-38 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | NC_002758.1121390.p0 | Protein | 1e-38 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | AE000516.2.gene3505. | Protein | 1e-28 | 43 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | HE999704.1.gene1528. | Protein | 6e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | VFG0596 | Protein | 7e-55 | 57 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | VFG1390 | Protein | 8e-38 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | VFG1386 | Protein | 6e-36 | 44 |
| czcR | YP_003773453.1 | response regulator for cobalt/zinc/cadmium resistance transcription regulator protein | VFG1389 | Protein | 1e-31 | 44 |
