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Name : tktA (Hsero_1415) Accession : YP_003774839.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1621064 - 1623058 bp Length : 1995 bp Strand : + Note : - DNA sequence : ATGATTTCCACTCTCCCCACCGACAAGATGGCCAACGCGATCCGCGCGCTGGCGATGGACGCAGTTCAAAAAGCCAATTC CGGACACCCGGGCATGCCGATGGGGATGGCGGAAATCGCAGTGGCCCTGTGGGCCAAGCACTATCGCCACAATCCGGCCA ATCCGCACTGGGCCAACCGCGACCGCTTCGTGCTCTCCAATGGCCACGGCTCCATGCTGCAATACGCGCTGCTGCACCTG ACCGGCTACGACCTGTCGATGGAAGACATCAAGTCCTTCCGCCAACTGCATTCCAAGACCGCCGGCCACCCCGAAGTGCA CATCACCCCGGGCGTGGAAACCACCACCGGCCCGCTGGGCCAGGGCATCACCAATGCGGTGGGCATGGCGCTGGCTGAAA AGCTGCTGGCCGCGGAATTCAACAAGCCCGGCCTGGCCGTGGTCGATCACTACACCTACGCCTTCGTCGGCGACGGCTGC CTGATGGAAGGCATCTCGCACGAAGCCTGCTCGCTGGCCGGCGTCCTGAACCTGTCCAAGCTGATCGTGCTGTATGACGA CAACGGCATCTCCATCGACGGTCACGTCGAAGGCTGGTTCAAGGACGACACCCCGAAGCGCTTCGAAGCCTACGGCTGGA ACGTCATCCCGGCCGTGGACGGCCACAGCGTCGAAGCCGTCAGCGCCGCCATCCACCAGGCCAAGCTGGCCGACAAGCCG ACCCTGATCTGCTGCCGTACCGTCATCGGCAAGGGTTCGCCCAACCTGGCCGGCACCGACAAGGTCCACGGCGCTGCCCT GGGCGACAAGGAAATCGCCGCCGTGCGCGAAGCGCTGGGCTGGACTTCCGCACCCTTCGAGATCCCGGCCGATGTCTATT CCGCCTGGGACGCCAAGGCCACCGGCGCCGACTTCGAAGCCAGCTGGAAGCAGACCTTCGACACCTACGCCGCCCAATAC CCGAGCGAAGCCGCCGAACTGCTGCGTCGCCTCAAGGGCGAACTGCCGGCCGCCTTCGAATCGACCGTGACCGCCTACAT CAATTCCACGCTGGAAAAGAAGGAAACCATCGCCACCCGCAAGGCCAGCCAGAACGCCATCCAGGCCTATGCGCAGGCGC TGCCGGAATTCCTGGGCGGCTCGGCCGACCTGACCGGCTCGAACCTGACCAACTGGAAGGAATCGGTGGCCGTGCGCGCC GACCAGCGCGGCAACCACATCAACTACGGTGTGCGTGAATTCGGCATGAGCGCCATCATGAACGGGATCGCCCTGCATGG CGGCTACCTGCCCTTCGGCGCCACCTTCCTGACCTTCTCGGACTACAGCCGCAATGCCCTGCGCATGGCTGCGCTGATGA AGATCCGTGCGCTGTTCGTGTTCACCCACGACTCCATCGGCCTGGGCGAAGACGGCCCCACCCACCAGTCGGTGGAACAC GTCTCCAGCCTGCGCCTGATCCCCAACCTGGACAACTGGCGTCCCTGCGACACCACCGAAACCGCGGTGGCCTGGGCCGA GTCCATCAAGCGTCACGATGGTCCCAGCACCCTGATCTTCTCGCGCCAGAACCTGCCGTTCCAGGAGCGCACCGACGCCC AGGTCAAGGACATCGCCCGTGGCGGCTACGTGCTGCGCGATGCGCCCAACGCCAAGGTCATCCTGATGGCGACCGGCTCC GAAATCGAACTGGCCACCAAGGCCGCGGATGCGCTGACCGCCGAAGGCATTGCCGTGCGCGTGGTGTCGATGCCCTCGAC CGACGTGTTCGATCGCCAGGATGCAGCCTACAAGGCTTCCGTGCTGACCCGAGGCGTGCCGCGCGTGGCCATCGAAGCCG GTGTGACCGCCTTCTGGCACAAGTACGTCGGCCTGGAAGGCGCCGTGGTCGGCATCGACACCTTCGGTGAATCGGCCCCG GCTGGCGTGCTGTTCAAGCACTTCGGCTTCACCGTCGAGAACGTGGTGGCCAAGGCCAAGGCAGTGCTGGCTTGA Protein sequence : MISTLPTDKMANAIRALAMDAVQKANSGHPGMPMGMAEIAVALWAKHYRHNPANPHWANRDRFVLSNGHGSMLQYALLHL TGYDLSMEDIKSFRQLHSKTAGHPEVHITPGVETTTGPLGQGITNAVGMALAEKLLAAEFNKPGLAVVDHYTYAFVGDGC LMEGISHEACSLAGVLNLSKLIVLYDDNGISIDGHVEGWFKDDTPKRFEAYGWNVIPAVDGHSVEAVSAAIHQAKLADKP TLICCRTVIGKGSPNLAGTDKVHGAALGDKEIAAVREALGWTSAPFEIPADVYSAWDAKATGADFEASWKQTFDTYAAQY PSEAAELLRRLKGELPAAFESTVTAYINSTLEKKETIATRKASQNAIQAYAQALPEFLGGSADLTGSNLTNWKESVAVRA DQRGNHINYGVREFGMSAIMNGIALHGGYLPFGATFLTFSDYSRNALRMAALMKIRALFVFTHDSIGLGEDGPTHQSVEH VSSLRLIPNLDNWRPCDTTETAVAWAESIKRHDGPSTLIFSRQNLPFQERTDAQVKDIARGGYVLRDAPNAKVILMATGS EIELATKAADALTAEGIAVRVVSMPSTDVFDRQDAAYKASVLTRGVPRVAIEAGVTAFWHKYVGLEGAVVGIDTFGESAP AGVLFKHFGFTVENVVAKAKAVLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 66 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 62 |
