Gene Information

Name : lspA (Hsero_1403)
Accession : YP_003774827.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 1605796 - 1606311 bp
Length : 516 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAACCAAAAAACGCTCTTCCTCTTCCAGCGCTTCCTCTTCCACCCAAGGGCTGCTGCCCTGGCTGGGCATCGCCAC
CATCGTGCTGCTGCTGGACCAGCTTTCCAAGATCACCATCCTCAAACTGTTCCACTACGGTGAGTCATTGCCGGTGACCG
GTTTCTTCAACCTGGTGCTGGTCTACAACAAGGGCGCGGCCTTCAGCTTCCTGGCCGCCAGTGGCGGCTGGCAGCGCTAC
CTGTTCACCGCCATCGGCATCGGTGCGGCCGTGTTCATCATCCACCTGCTGCGCAAGCATCCCGGCCAGCGCATGTTCTG
CTGGGCGCTGGCGCTGATCCTGGGCGGTGCGATCGGCAACGTGATCGACCGCGTGGTCTACGGCCATGTGATCGATTTCC
TCGATGTCTACGTGGGCAACTGGCACTGGCCGGCCTTCAACATCGCCGATAGTGCGATCTGCGTGGGTGCGGTATTGTTC
GTCGTGGATGAACTGCGCCGCGTCTCCAGGAAGTAA

Protein sequence : 
MATKKRSSSSSASSSTQGLLPWLGIATIVLLLDQLSKITILKLFHYGESLPVTGFFNLVLVYNKGAAFSFLAASGGWQRY
LFTAIGIGAAVFIIHLLRKHPGQRMFCWALALILGGAIGNVIDRVVYGHVIDFLDVYVGNWHWPAFNIADSAICVGAVLF
VVDELRRVSRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 7e-18 49
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 7e-18 49
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 5e-18 49
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 5e-18 49
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 5e-18 49
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 3e-16 49
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 4e-16 49
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 6e-16 49
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 4e-13 44