Gene Information

Name : recG (Hsero_1227)
Accession : YP_003774651.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Resistance
Product : TP-dependent DNA helicase RecG protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : 3.6.1.-
Position : 1385683 - 1387851 bp
Length : 2169 bp
Strand : -
Note : -

DNA sequence :
ATGCGCGTGCGACTAGTCACAATGGCTCCTCGTCCAACCAACGCCGACCGCATGCCCGCTACCGCGAAGAAAACCAGCCC
GCCGGCCCCGAAGAAAAAGGCCACCGCCGCAAAATCGGCTGCAAAGCCGGCTGCAAAGCCCGAAAACAAGCTGGCCAAGC
TGGGCCTGCACAACGACATGGACCTGGTGCTGCACCTGCCGCTGCGCTATGAGGATGAAACCAGCCTCATGAGCATCGCC
GAAGCCTCCATGCGCGGCTTGCAGACCGTGCAGGTGGAAGGCGTGGTGAGCTCCTGCGAGGTGCAGTTCCGCCCGCGTCG
GCAGTTGATCGTGACCGTGGGCGACGACAGCGGCCAGCTCACCCTGCGCTTCCTCAACTTCTACGGCAGCCAGACCAAGC
AAATGGCCGAAGGCACGCGACTGCGGGTGCGCGGGGAATTGCGGCACGGCTTTTTCGGCGCGGAGATGGTCCATCCCTCC
TACAAGGTGGTCAACGAGGGCGCGCCGCTGCCGGACGTGCTCACCCCCGTCTATCCGGCCGGCGAGGGCCTGTCCCAGGC
CTACCTGCGCAAGGCCATTGCCAACGCCATGAGCCGGCTGGACTGGAGCGATACGCTGCCGCCCTCGATGCTGGCCACGC
TGAACCTGGCCGCCTTCGAGCCTTCGGTGCGCCTGCTGCACAACCCGCCGCCGGACGTGGATGAACATGCGCTCATCGAG
AAATCCCACCCGGCCTGGATACGGATGAAATTCGACGAGCTGCTGGCCCAGCAGCTCTCGCTCAAGCGCGCCCAGGCGGC
GCGCCGCGCCAAGAGCGCGCGCGCGCTGCCGGTGACTGGACGCATTACCGAGGAACTGACCAGGCTCCTGCCCTTCCAGC
TGACCGGGGCGCAACAGCGCGTCCTGGAAGAAATCCGCGCCGACCTGCGCCAGTCCTTCCCGATGCAGCGGCTGCTGCAG
GGCGACGTAGGCAGCGGCAAGACGGTGGTGGCGGCGCTGGCGGCGGCGCAGGCCATCGACAGCGGCTGCCAGGCGGTGCT
GATGGCGCCCACTGAAATCCTGGCCGAGCAGCATTTCCGCAAGATCGCTGCCTGGATGGAGCCGCTCGATGTCGGCGTGG
CCTGGCTTTCCGGGAGCCAGAAGAAAAAGGAAAAGACCGAGGCGCTGGCGCACATCGAGTCCGGCGCGGCACGGCTGGTC
ATCGGCACCCACGCGCTGATCCAGGACACGGTGCAATTCGAGAACCTGGGGCTGGTGATCGTGGACGAGCAACACCGCTT
CGGCGTCGGCCAGCGGCTGGCCTTGCGCAACAAGAGCTTCAACCCGGCCGATCACGACTCGCCGGCCGTGCCGCACCAGT
TGATGATGTCGGCCACGCCCATCCCGCGCACCCTGGCCATGACCTATTACGCCGATCTGGAAGTATCGGTGATCGACGAA
CTGCCGCCAGGCCGCTCACCCATCGTCACGCGCGTGATCGACCAGAACCGCCGGGACGAGGTGATCGAACGGGTCCATGC
CGCCGCGCTGGAAGGCAAGCAGATCTACTGGGTCTGTCCGCTCATCGAGGAATCCGAGGCGCTGCAGTTGCAGACCGCCA
CCGACACCCATGCGGCGCTCTCGGCCGCCCTGCCCGACCTGCAGATCGGCCTGGTGCATGGCCGCATGAAACCGGTGGAA
AAACAGATGGTCATGGAAGGCTTCAGCCGGGGCGCCATTCATCTGCTGGTGGCCACCACGGTCATCGAGGTGGGCGTGGA
TGTGCCCAATGCGTCGCTGATGGTGATCGAACATGCCGAACGTTTCGGCCTGTCGCAGCTGCACCAGTTGCGCGGGCGGG
TGGGACGGGGATCGGCGGCCAGCGTGTGCCTGCTGCTCTATCAGGGGCCGCTGGGCGGCACGGCCAAACAGCGCCTGGCC
ACCATGCGCGAAACCACGGACGGCTTCGAGATCGCCCGGCGCGACCTGGACATCCGCGGCCCCGGCGAATTCCTCGGTGC
GCGCCAGTCGGGTGAAGCCATGCTGCGCTTCGCCGACCTGGCCACCGACCAGTGGCTGGTGGAAAAGGCGCGCGATACGG
CCCAGGCGCTGCTCCAGCACGCCCCGGACATCGTCGATCGTCATCTGGCCCGCTGGCTCGGAGGACGGGAAGATTATCTC
AAAGTGTAA

Protein sequence :
MRVRLVTMAPRPTNADRMPATAKKTSPPAPKKKATAAKSAAKPAAKPENKLAKLGLHNDMDLVLHLPLRYEDETSLMSIA
EASMRGLQTVQVEGVVSSCEVQFRPRRQLIVTVGDDSGQLTLRFLNFYGSQTKQMAEGTRLRVRGELRHGFFGAEMVHPS
YKVVNEGAPLPDVLTPVYPAGEGLSQAYLRKAIANAMSRLDWSDTLPPSMLATLNLAAFEPSVRLLHNPPPDVDEHALIE
KSHPAWIRMKFDELLAQQLSLKRAQAARRAKSARALPVTGRITEELTRLLPFQLTGAQQRVLEEIRADLRQSFPMQRLLQ
GDVGSGKTVVAALAAAQAIDSGCQAVLMAPTEILAEQHFRKIAAWMEPLDVGVAWLSGSQKKKEKTEALAHIESGAARLV
IGTHALIQDTVQFENLGLVIVDEQHRFGVGQRLALRNKSFNPADHDSPAVPHQLMMSATPIPRTLAMTYYADLEVSVIDE
LPPGRSPIVTRVIDQNRRDEVIERVHAAALEGKQIYWVCPLIEESEALQLQTATDTHAALSAALPDLQIGLVHGRMKPVE
KQMVMEGFSRGAIHLLVATTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGSAASVCLLLYQGPLGGTAKQRLA
TMRETTDGFEIARRDLDIRGPGEFLGARQSGEAMLRFADLATDQWLVEKARDTAQALLQHAPDIVDRHLARWLGGREDYL
KV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 6e-107 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
recG YP_003774651.1 TP-dependent DNA helicase RecG protein BAC0356 Protein 9e-150 53