Name : recG (Hsero_1227) Accession : YP_003774651.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Resistance Product : TP-dependent DNA helicase RecG protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : 3.6.1.- Position : 1385683 - 1387851 bp Length : 2169 bp Strand : - Note : - DNA sequence : ATGCGCGTGCGACTAGTCACAATGGCTCCTCGTCCAACCAACGCCGACCGCATGCCCGCTACCGCGAAGAAAACCAGCCC GCCGGCCCCGAAGAAAAAGGCCACCGCCGCAAAATCGGCTGCAAAGCCGGCTGCAAAGCCCGAAAACAAGCTGGCCAAGC TGGGCCTGCACAACGACATGGACCTGGTGCTGCACCTGCCGCTGCGCTATGAGGATGAAACCAGCCTCATGAGCATCGCC GAAGCCTCCATGCGCGGCTTGCAGACCGTGCAGGTGGAAGGCGTGGTGAGCTCCTGCGAGGTGCAGTTCCGCCCGCGTCG GCAGTTGATCGTGACCGTGGGCGACGACAGCGGCCAGCTCACCCTGCGCTTCCTCAACTTCTACGGCAGCCAGACCAAGC AAATGGCCGAAGGCACGCGACTGCGGGTGCGCGGGGAATTGCGGCACGGCTTTTTCGGCGCGGAGATGGTCCATCCCTCC TACAAGGTGGTCAACGAGGGCGCGCCGCTGCCGGACGTGCTCACCCCCGTCTATCCGGCCGGCGAGGGCCTGTCCCAGGC CTACCTGCGCAAGGCCATTGCCAACGCCATGAGCCGGCTGGACTGGAGCGATACGCTGCCGCCCTCGATGCTGGCCACGC TGAACCTGGCCGCCTTCGAGCCTTCGGTGCGCCTGCTGCACAACCCGCCGCCGGACGTGGATGAACATGCGCTCATCGAG AAATCCCACCCGGCCTGGATACGGATGAAATTCGACGAGCTGCTGGCCCAGCAGCTCTCGCTCAAGCGCGCCCAGGCGGC GCGCCGCGCCAAGAGCGCGCGCGCGCTGCCGGTGACTGGACGCATTACCGAGGAACTGACCAGGCTCCTGCCCTTCCAGC TGACCGGGGCGCAACAGCGCGTCCTGGAAGAAATCCGCGCCGACCTGCGCCAGTCCTTCCCGATGCAGCGGCTGCTGCAG GGCGACGTAGGCAGCGGCAAGACGGTGGTGGCGGCGCTGGCGGCGGCGCAGGCCATCGACAGCGGCTGCCAGGCGGTGCT GATGGCGCCCACTGAAATCCTGGCCGAGCAGCATTTCCGCAAGATCGCTGCCTGGATGGAGCCGCTCGATGTCGGCGTGG CCTGGCTTTCCGGGAGCCAGAAGAAAAAGGAAAAGACCGAGGCGCTGGCGCACATCGAGTCCGGCGCGGCACGGCTGGTC ATCGGCACCCACGCGCTGATCCAGGACACGGTGCAATTCGAGAACCTGGGGCTGGTGATCGTGGACGAGCAACACCGCTT CGGCGTCGGCCAGCGGCTGGCCTTGCGCAACAAGAGCTTCAACCCGGCCGATCACGACTCGCCGGCCGTGCCGCACCAGT TGATGATGTCGGCCACGCCCATCCCGCGCACCCTGGCCATGACCTATTACGCCGATCTGGAAGTATCGGTGATCGACGAA CTGCCGCCAGGCCGCTCACCCATCGTCACGCGCGTGATCGACCAGAACCGCCGGGACGAGGTGATCGAACGGGTCCATGC CGCCGCGCTGGAAGGCAAGCAGATCTACTGGGTCTGTCCGCTCATCGAGGAATCCGAGGCGCTGCAGTTGCAGACCGCCA CCGACACCCATGCGGCGCTCTCGGCCGCCCTGCCCGACCTGCAGATCGGCCTGGTGCATGGCCGCATGAAACCGGTGGAA AAACAGATGGTCATGGAAGGCTTCAGCCGGGGCGCCATTCATCTGCTGGTGGCCACCACGGTCATCGAGGTGGGCGTGGA TGTGCCCAATGCGTCGCTGATGGTGATCGAACATGCCGAACGTTTCGGCCTGTCGCAGCTGCACCAGTTGCGCGGGCGGG TGGGACGGGGATCGGCGGCCAGCGTGTGCCTGCTGCTCTATCAGGGGCCGCTGGGCGGCACGGCCAAACAGCGCCTGGCC ACCATGCGCGAAACCACGGACGGCTTCGAGATCGCCCGGCGCGACCTGGACATCCGCGGCCCCGGCGAATTCCTCGGTGC GCGCCAGTCGGGTGAAGCCATGCTGCGCTTCGCCGACCTGGCCACCGACCAGTGGCTGGTGGAAAAGGCGCGCGATACGG CCCAGGCGCTGCTCCAGCACGCCCCGGACATCGTCGATCGTCATCTGGCCCGCTGGCTCGGAGGACGGGAAGATTATCTC AAAGTGTAA Protein sequence : MRVRLVTMAPRPTNADRMPATAKKTSPPAPKKKATAAKSAAKPAAKPENKLAKLGLHNDMDLVLHLPLRYEDETSLMSIA EASMRGLQTVQVEGVVSSCEVQFRPRRQLIVTVGDDSGQLTLRFLNFYGSQTKQMAEGTRLRVRGELRHGFFGAEMVHPS YKVVNEGAPLPDVLTPVYPAGEGLSQAYLRKAIANAMSRLDWSDTLPPSMLATLNLAAFEPSVRLLHNPPPDVDEHALIE KSHPAWIRMKFDELLAQQLSLKRAQAARRAKSARALPVTGRITEELTRLLPFQLTGAQQRVLEEIRADLRQSFPMQRLLQ GDVGSGKTVVAALAAAQAIDSGCQAVLMAPTEILAEQHFRKIAAWMEPLDVGVAWLSGSQKKKEKTEALAHIESGAARLV IGTHALIQDTVQFENLGLVIVDEQHRFGVGQRLALRNKSFNPADHDSPAVPHQLMMSATPIPRTLAMTYYADLEVSVIDE LPPGRSPIVTRVIDQNRRDEVIERVHAAALEGKQIYWVCPLIEESEALQLQTATDTHAALSAALPDLQIGLVHGRMKPVE KQMVMEGFSRGAIHLLVATTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGSAASVCLLLYQGPLGGTAKQRLA TMRETTDGFEIARRDLDIRGPGEFLGARQSGEAMLRFADLATDQWLVEKARDTAQALLQHAPDIVDRHLARWLGGREDYL KV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 6e-107 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
recG | YP_003774651.1 | TP-dependent DNA helicase RecG protein | BAC0356 | Protein | 9e-150 | 53 |