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Name : gabD2 (Hsero_1125) Accession : YP_003774550.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : NADP-dependent succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1281071 - 1282552 bp Length : 1482 bp Strand : - Note : - DNA sequence : ATGACCTCTCTTACCTTGCAACGCCAGGACCTCATGCCCGGCGCCCAACTGATCGGCGCCGACTGGCGCGGCGCGGCCGA TGGCCGCCAGCTCGACGTGAGCGACCCGGCCACCGGCCAGGTGTTCGCCTCGGTGCCCGATGGCGGCGCGGCCGATGCCC GCGCCGCCGTGGAGGCGGCCGTGGCCGCCTTTGCGGCCTGGCGCGCCACGCCGGCCAAGCAGCGCGCCGGCATCATCAAG CGCTGGAACGATCTGCTGCTGGCGCATCAGGACGACCTGGGCCGCCTGATCTCGCGCGAGCAAGGCAAACCCCTGGCCGA AGCCAAGGGGGAAGTGGCCTATGCCGCCAGTTACGTGGAATGGTTTGGCGAAGAAGCCACGCGCGCCAACGGCGACATCA TTCCCGCACCCGTCACGGGCCGCCGCATGATGGCCCTGAAGGAACCGGTCGGTGTCGTGGCCGCCATCACGCCGTGGAAT TTCCCGGCGGCGATGATCGCCCGCAAGATCGCTCCAGCCCTGGCCGCAGGCTGCACGGTGGTGTGCAAGCCGGCCGAGGA TACGCCGCTGACGTCGCTGGCGCTGGTCCGCCTGGCGCAGGAAGCGGGGGTGCCCGTTGGCGTCATCAACATCGTCACCG CCTCGCGCGAACGCACGCCCGAGGTGGTGGACGTGTGGCTGGCCGATGGACGGGTACGCAAGATCAGCTTCACCGGATCG ACCGCCGTGGGCAAGCACCTGGCGCGCCATTCGGCCGACACCCTCAAGAAGCTCTCGCTGGAACTGGGCGGCAATGCGCC CTTCATCGTGTTTGACGATGCGGACGTGGACGCCGCCATCGATGGCGTGATGGCGGCCAAGTTCCGCAACGGTGGCCAGA CCTGCGTGAGTCCCAACCGCATCTACGTGCAGGAGAAGGTGTACGACGCCTTCGTGGACAAGCTGGGCGCGCGCGTGGCC GCCTTGAAGGTCGGCCCGGCCACCGATCCGGCCTCGCAGATCGGCCCCATGATCAATGCCCGCGCCATCGCCAAGATCGA CCAGCACGTGCGCGATGCCATCGCACGCGGCGCGCGCGTGATCACCGGCGGCAAACGGCTGCAGGGTCCCGGTTTCGGCA GCGACAACTACTATGCCCCGACCGTGCTGGCCGACGTGACCGGCGCGATGCAATGCAGCTGCGAAGAGACCTTCGGCCCG GTCGCCCCGATCACCCGCTTCGCCACCGAAGACGAAGTGATTGCCGCCGCCAATGCCACGCCCTTCGGCCTGGCGGCCTA CTTCTACTCCACCGATGTGCGGCGCATCCATCGCGTCACCGATGCGCTGGAAAGCGGTATCGTGGGCGTCAACGAAGGCG CCCTGGCGGCCGAGGCCGCGCCCTTTGGCGGCGTGAAGGAATCGGGCTACGGCCGCGAAGGCTCGGTACATGGCCTGGAC GATTACCTGCATACCAAATACGTTTGCCAGGGCCAGCTCTGA Protein sequence : MTSLTLQRQDLMPGAQLIGADWRGAADGRQLDVSDPATGQVFASVPDGGAADARAAVEAAVAAFAAWRATPAKQRAGIIK RWNDLLLAHQDDLGRLISREQGKPLAEAKGEVAYAASYVEWFGEEATRANGDIIPAPVTGRRMMALKEPVGVVAAITPWN FPAAMIARKIAPALAAGCTVVCKPAEDTPLTSLALVRLAQEAGVPVGVINIVTASRERTPEVVDVWLADGRVRKISFTGS TAVGKHLARHSADTLKKLSLELGGNAPFIVFDDADVDAAIDGVMAAKFRNGGQTCVSPNRIYVQEKVYDAFVDKLGARVA ALKVGPATDPASQIGPMINARAIAKIDQHVRDAIARGARVITGGKRLQGPGFGSDNYYAPTVLADVTGAMQCSCEETFGP VAPITRFATEDEVIAAANATPFGLAAYFYSTDVRRIHRVTDALESGIVGVNEGALAAEAAPFGGVKESGYGREGSVHGLD DYLHTKYVCQGQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-116 | 56 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-80 | 41 |
