Gene Information

Name : Hsero_1109 (Hsero_1109)
Accession : YP_003774534.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : 1.1.1.100
Position : 1260697 - 1261446 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGCTCAAGGACAAGGTTGCCGTCATCACCGGCGGTGCAGGAATCAATGGTCTGGGTTACGCCACGGCGCGCCTGAT
GGCCGAGCAAGGCGCCCGCGTGGTGGTGCTGGACCTGGCCCAGGCCGATCCGGCGGCGGCCGCTGCGCGCATCGGCAGCC
AGCATCTGGGCCTGGTGGCCGACGTGACCGACAAGGCTTCCTGCGAAACGGCAGCGGCGGCCATCCTCCAGCAGTTCGGC
CGCATCGACATCCTGGTCAACAATGCCGGCATCACCCAGCCGGTCAAGACGCTGGAGATCACCGGCGCCGACTACGACCG
CATCCTCGACGTCAGCCTGCGCGGCACGCTCTACATGTCGCAGGCGGTGCTGCCGGCCATGCGCGCGCAGCAGAACGGTT
CCATCATCTGCATCTCCTCGGTGTCGGCCCAGCGCGGCGGCGGCATCCTGGGCGGTCCGCACTACTCGGCGGCCAAGGCC
GGCGTGCTCGGCCTGGCCCGCGCCATGGCGCGCGAGTTCGGTCCGGAAGGCATCCGCGTCAACAGCATCACCCCGGGCCT
GATCGGCACCGACATCATCAAGGGCAAGCTCACCGAAGAAAAGAAGGCCGAGATCGCCGAGACCATTCCGCTGGCGCGCC
TGGGCCGTGCCGACGACATCGGCGGCGCCTGCGTCTTTCTGGGCAGCGACCTCTCACAATACTGCACCGGCATCACGCTG
GACGTTAATGGTGGAATGCTGATTCATTAA

Protein sequence : 
MLLKDKVAVITGGAGINGLGYATARLMAEQGARVVVLDLAQADPAAAAARIGSQHLGLVADVTDKASCETAAAAILQQFG
RIDILVNNAGITQPVKTLEITGADYDRILDVSLRGTLYMSQAVLPAMRAQQNGSIICISSVSAQRGGGILGGPHYSAAKA
GVLGLARAMAREFGPEGIRVNSITPGLIGTDIIKGKLTEEKKAEIAETIPLARLGRADDIGGACVFLGSDLSQYCTGITL
DVNGGMLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-73 66
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 9e-74 66
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 9e-74 66
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-74 66
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-73 65