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Name : gabD1 (Hsero_1077) Accession : YP_003774502.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : NADP-dependent succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1189835 - 1191289 bp Length : 1455 bp Strand : - Note : - DNA sequence : ATGCTGCAACTGAAAGACCCTGCCCTGCTGCGCCAGCAAGCCTTTGTCAACGGCCAGTGGTGCGACGCCGACCAGGGCGA ACGCCTGGCCGTACACAATCCGGCCAACGGCGAACTGCTCGGCCATGTTCCCCTGATGGGAGCAGCCGAGACACGCCGCG CCATCGAAGCTGCCAATGCCGCCTGGCCCGCCTGGAAGAAGAAGACCGCCAAGGAACGCAGCGCCATCCTGCGCCGCTGG TACGAACTGATGCTGGCCAACACGGACGACCTGGCGTTGATCATGACCGCCGAGCAGGGCAAGCCGCTGGCCGAGGCACG GGGCGAGATCGGCTATGCCGCCTCCTTCATCGAGTGGTTTGCCGAAGAGGGCAAGCGCACCTATGGCGACACCATCCCCT CCCCTTCGCCTTCCAACCGCATCGTCGTCATCAAGGAAGCCATCGGCGTATGCGCCGCGATCACGCCGTGGAACTTCCCG GCCGCCATGATCACCCGCAAGGCCGGCCCGGCGCTGGCCGCCGGCTGCCCGATGGTCTTGAAGCCGGCTGAAGCCACCCC CTTCTCGGCGCTGGCGCTGGCCGTGCTGGCCGAGCGCGCGGGCATTCCGGCGGGCGTGTTCAGCGTGGTCACCGGCACGC CCAAGGGCATCGGCGGCGAGATGACCTCCAACCCCATCGTGCGCAAGATCAGCTTCACCGGCTCCACTGGCGTGGGCAAG CTGCTGATGCAGCAGAGCGCGTCCAGCATCAAGAAGCTCTCGCTGGAACTGGGCGGCAATGCGCCCTTCATCGTCTTTGA CGACGCCGACCTGGACGCCGCCGTCGAAGGCGCGATCGCTTCCAAGTACCGCAACGCCGGCCAGACCTGCGTGTGCGCCA ACCGCATCTATGTGCAGGATGGCGTCTATGACGCCTTCGCCGCCAAGCTGGTGGAAGCGGTGAAGAAGTTCAAGGTCGGC CAAGGCACCGAAGAAGGCGTGACCCAGGGTCCGCTGATCAATGAGCAGGCCGTGCAGAAGGTCGAGCAGCACGTCGCCGA CGCCGTCGCCAAGGGCGCCCGCGTACTGCTGGGCGGCAAGCGCCACGCGCTGGGCCACAGCTTCTTCGAGCCCACCGTGC TGGCCGACGTCACCCCGGCCATGCAGGTCGCCCGCGAGGAGACCTTTGGCCCCATGGCCCCGCTGTTCCGCTTCAAGACC GACGAAGAAGTCCTGGCCCTGGCCAATGACACCGAGTTCGGCCTGGCCAGCTATTTCTACTCACGCGACATCGGCCGCAT CTGGCGCGTGGCCGAAGGGCTGGAGTCGGGCATGGTGGGGATCAATACCGGGCTGATCTCCAACGAGGTCGCGCCGTTTG GCGGCGTGAAGCAGTCGGGACTGGGACGGGAAGGGTCGCACTACGGGATTGATGATTACCTGGTGGTGAAGTATCTGTGC ATGGGGGGGATTTGA Protein sequence : MLQLKDPALLRQQAFVNGQWCDADQGERLAVHNPANGELLGHVPLMGAAETRRAIEAANAAWPAWKKKTAKERSAILRRW YELMLANTDDLALIMTAEQGKPLAEARGEIGYAASFIEWFAEEGKRTYGDTIPSPSPSNRIVVIKEAIGVCAAITPWNFP AAMITRKAGPALAAGCPMVLKPAEATPFSALALAVLAERAGIPAGVFSVVTGTPKGIGGEMTSNPIVRKISFTGSTGVGK LLMQQSASSIKKLSLELGGNAPFIVFDDADLDAAVEGAIASKYRNAGQTCVCANRIYVQDGVYDAFAAKLVEAVKKFKVG QGTEEGVTQGPLINEQAVQKVEQHVADAVAKGARVLLGGKRHALGHSFFEPTVLADVTPAMQVAREETFGPMAPLFRFKT DEEVLALANDTEFGLASYFYSRDIGRIWRVAEGLESGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYLVVKYLC MGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-156 | 70 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 5e-56 | 43 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-83 | 41 |
