Gene Information

Name : hsdM (LEGAS_0980)
Accession : YP_003772447.1
Strain : Leuconostoc gasicomitatum LMG 18811
Genome accession: NC_014319
Putative virulence/resistance : Unknown
Product : type I restriction-modification system subunit M
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 992743 - 994338 bp
Length : 1596 bp
Strand : +
Note : -

DNA sequence :
ATGGCAACAAGTTTAGAGCAACAACTATGGGCAGCAGCGGATATTTTACGTGGTAAGATGGATGCTAGTGAATATAAAAA
CTATCTTTTAGGACTAGTCTTTTACAAGTATCTTTCAGATGCTGAACTTCGTGAAGTCTATGAACAAGAGAATGGTCAAA
CGAAAGATTTTCCAGATCGTAGTGTCCAATTTCAAACCCTGACAGAATGGTTTAAGGACGATGCAGAAGAACTAACAGAA
ATTATTCAACTGCAAAAAGGCTACTTTATTCAGCCAACACAATTATTTTATACGTATCGTCAACAAGCAGATCGCTACGA
ATTTAATTTAACAGATTTGCAAGCTGGTTTTAATGAATTAGAACGTCAAGGTGATCAATTCAAAGGATTGTTTGCAGATA
TTGATTTAAACTCAACTAAACTTGGTTCAAATGCACAACAACGTAACGTCACTATTACCGAAGTGCTTCGTGCGTTAGAT
GAAATTGATTTGTTTGAACATGATGGTGATGTAATTGGCGATGCTTATGAATACTTGATTGGCCAATTTGCGGCTGGGGC
TGGTAAGAAAGCTGGAGAATTTTATACACCACAAGCCGTGTCACGTATCATTTCTGAAATTACTTCTATCGGCCAAGAGG
ATCGGACACCCTTTCATATCTATGATCCAACAATGGGTTCAGGTTCATTGATGTTGAATATCCGTCGTTATTTATCTAAT
CCAAAGCAAATCCATTATCATGGGCAGGAACTAAATACAACCACTTATAACTTAGCACGTATGAATCTAATTCTTCATGG
CGTTGATCAAGAGCGTATGAATTTAAATAATGGTGATACCTTAGATTCTGATTGGCCAACTGAAGAGCCTTATCAATTCG
ATGCCGTAGTGATGAATCCACCATACTCAGCTAAATGGTCAGCAGCAGATAAGTTTTTATCAGATCAACGATTTGAACGT
TTCGGTAAACTAGCTCCTAAATCAAAAGCTGATTTCGCCTTCTTATTACACGGTTTTTATCACTTGAAAGATACTGGCAC
AATGGGTATTGTCTTACCACACGGTGTATTATTCCGTGGTGCAGCAGAGGGTACTATTCGTCAAGCATTACTTGAAATGG
GAGCTATTGATGCCGTGATTGGTTTACCCGCTAATATCTTTTATGGGACAAGTATTCCAACCACTGTGATTATTCTTAAA
AAGCATCGTGCAACACGAGATGTTTTGTTTATTGATGCTTCAAGTGATTTTGATAAGCAAAAGAATCAAAATATTTTATT
GCCAGCACACATTGAAAAGATTGTGAAAGCCTATAAGCAACGTGAAGACGCAGATAAGTATTCACATGTAGCAAGCTTTG
AAGAAATTAAAGAAAATGATTTCAATTTAAATATTCCACGATATGTCGATACTTTTGAAGAAGAAGAGCCAGTGAATCTT
GTAAAAGTCAGTAACGAAATTGCTAAGATTGAAAACGAGCTTTCCAAAAATCAATCAGATCTATTAGACATGATGAATCA
AATAACAGTAACAAAAGAAAGTGAAGAGATTATTGAAGCCACAAAAAAAATTCTAGCAGGTGGTCAACATGAGTAA

Protein sequence :
MATSLEQQLWAAADILRGKMDASEYKNYLLGLVFYKYLSDAELREVYEQENGQTKDFPDRSVQFQTLTEWFKDDAEELTE
IIQLQKGYFIQPTQLFYTYRQQADRYEFNLTDLQAGFNELERQGDQFKGLFADIDLNSTKLGSNAQQRNVTITEVLRALD
EIDLFEHDGDVIGDAYEYLIGQFAAGAGKKAGEFYTPQAVSRIISEITSIGQEDRTPFHIYDPTMGSGSLMLNIRRYLSN
PKQIHYHGQELNTTTYNLARMNLILHGVDQERMNLNNGDTLDSDWPTEEPYQFDAVVMNPPYSAKWSAADKFLSDQRFER
FGKLAPKSKADFAFLLHGFYHLKDTGTMGIVLPHGVLFRGAAEGTIRQALLEMGAIDAVIGLPANIFYGTSIPTTVIILK
KHRATRDVLFIDASSDFDKQKNQNILLPAHIEKIVKAYKQREDADKYSHVASFEEIKENDFNLNIPRYVDTFEEEEPVNL
VKVSNEIAKIENELSKNQSDLLDMMNQITVTKESEEIIEATKKILAGGQHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 7e-107 49
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 3e-105 48
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 9e-105 48
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 3e-105 48
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 8e-105 48
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 1e-103 48
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 3e-105 48
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 8e-105 48
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 8e-105 48
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 2e-104 48
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-105 48
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 8e-105 48
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 2e-104 48
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 2e-104 48
ORF6 BAC22943.1 - Not tested etd PI Protein 1e-104 48
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 2e-104 48
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 4e-105 48
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 1e-104 48
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 3e-105 48
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 5e-105 48
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 5e-105 48
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 6e-104 47