Gene Information

Name : clpL (LEGAS_0323)
Accession : YP_003771790.1
Strain : Leuconostoc gasicomitatum LMG 18811
Genome accession: NC_014319
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpL
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 325880 - 328003 bp
Length : 2124 bp
Strand : +
Note : -

DNA sequence :
ATGGCTAATGACAATTTTTTAAATGATCCATTCGGATCAGATATGAACAATATTTTTAACAATATGATGGGTAACATGAA
CGGTTATAATTCTGAAAACCGGCGTTATCTTATCAATGGACAAGAAGTGACACCTGAGCAATTTGCACAATACCGTCAAA
GCGGACAGTTGCCACAGGGTCAACAGGCGATAATTAATGGGGATAGTACTGGTCGACAGGGAGCTCAGTCACAAGGACAA
CCTCAGCCGGAAGGTATATTAGCTAAGTTGGGCCGTAATTTGACGCAAGAAGCACGTGATGGTTTGCTTGATCCAGTGAT
CGGGCGTAACAAGGAAATTCAAGAGACTGCAGAAATTTTGGGCCGTCGTACGAAGAATAATCCAGTGTTAGTTGGCGATG
CGGGTGTTGGTAAAACAGCTGTCGTTGAAGGTCTGGCGCAAGCAATTGTGACAGGGGATGTACCTGCCGCCATCAAAGAT
AAAGAAATTTATTCGATTGATATCTCAAGTTTAGAGGCAGGGACACAATTCCGTGGTGCCTTTGAAGAAAATATTCAAAA
TTTGATGAAAGAGGTTAAGTCAGCAGGAAATGTGATCTTATTCTTTGATGAAATTCATCAAATTTTAGGTGCTGGTTCTA
CTGGTGGTGAAGATGGTGGCAAAGGTTTGGCTGATATTATCAAACCAGCCTTGAGTCGAGGTGAAATTTCCGTCATTGGT
GCGACAACGCAAGATGAATATCGTAACACTATTATGAAAAATGCTGCTTTGGCACGCCGATTTAATGAAGTGACTGTTAA
TGCCCCATCTGCCAAAGATACACTGCAAATTTTAAAGGGTATTGCTGCATTGTATGAAACGCATCATCATGTTTCCTTAC
CAGAAGATGTGTTGAAGGCTGCTGTTGATTACGCGGTACAATATATTCCACAACGGTCATTGCCCGATAAGGCCATAGAT
TTGTTGGATATGACAGCAGCTCATTTGAGTGCTAAAAACCCAGTAACAGACAAAGTCAGTTTAGAAAAACAATTGCATGA
CACTAAGGCAAAGCAGGAAAAAGCTGTTGCAGACGAAGATTTTGAGGCAGCATTAAAACATAAGAATACAATTGCTGAGT
TGGAAAAGAAAATTGCTGGGGCAGATGAAGCAACAAAAGTTGTTGCAACTGCTAATGATGTGGCAGAGTCTGTTGAACGT
TTGACAGGTATTCCAGTCGCACAAATGGGTGCTTCTGATATTGAACGTTTGAAGACAATTGGTGATCGCCTGGCTGGTAA
AGTTATCGGACAAGAAGACGCAGTCAATATGGTTGCACGTGCTATTCGTCGTAATCGTGCGGGATTTGACGAAGGCAATC
GACCAATTGGTAGTTTCTTATTTGTTGGTCCAACAGGTGTTGGAAAGACAGAGTTAGCTAAGCAACTAGCGTTAGATATG
TTTGGTAGTAAAGATAACATTGTACGATTAGATATGTCAGAGTATTCAGACTTGACAGCAGTTTCAAAGTTAATTGGTAC
TACTGCTGGTTATGTTGGGTATGATGATAATAGCAACACGTTGACAGAAAAAGTTCGTCGTAATCCTTATTCCATTGTCT
TACTTGATGAAATTGAAAAGGCAAATCCGCAAATCTTAACATTATTACTACAAGTAATGGATGATGGTCGGCTCACTGAT
GGTCAAGGTAATGTTGTTAACTTCAAAAATACAGTGATTATTGCAACTTCAAATGCCGGCTTTTCAGATAAAAGTGATGG
GGAGCTTATGTCGCGTTTGGCACCATACTTCCGTCCGGAATTCTTAAACCGTTTTAACGGCGTGATTGAATTTTCAACTT
TGAGTAAAGATGATCTTAAGCAAATTGTTGATTTAATGCTAGCTGATGTGAATCAGACATTAGCTAAGAAAGAGTTAACT
TTGCAGGTTTCTGACGATGTCAAGAATCATTTAATTGAAGATGGTTATGACGAAGCGATGGGTGCACGACCACTCCGTCG
GGTGATTGAACAACAAATTCGTGATCAAGTCACTGACTTTTATCTTGATAATCCTGGCGAGAAAAAACTTAGTGCAGATT
TAGTTGATGGTCAAGTTGTCATTTCGGCTATTATTCAAAAATAA

Protein sequence :
MANDNFLNDPFGSDMNNIFNNMMGNMNGYNSENRRYLINGQEVTPEQFAQYRQSGQLPQGQQAIINGDSTGRQGAQSQGQ
PQPEGILAKLGRNLTQEARDGLLDPVIGRNKEIQETAEILGRRTKNNPVLVGDAGVGKTAVVEGLAQAIVTGDVPAAIKD
KEIYSIDISSLEAGTQFRGAFEENIQNLMKEVKSAGNVILFFDEIHQILGAGSTGGEDGGKGLADIIKPALSRGEISVIG
ATTQDEYRNTIMKNAALARRFNEVTVNAPSAKDTLQILKGIAALYETHHHVSLPEDVLKAAVDYAVQYIPQRSLPDKAID
LLDMTAAHLSAKNPVTDKVSLEKQLHDTKAKQEKAVADEDFEAALKHKNTIAELEKKIAGADEATKVVATANDVAESVER
LTGIPVAQMGASDIERLKTIGDRLAGKVIGQEDAVNMVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDM
FGSKDNIVRLDMSEYSDLTAVSKLIGTTAGYVGYDDNSNTLTEKVRRNPYSIVLLDEIEKANPQILTLLLQVMDDGRLTD
GQGNVVNFKNTVIIATSNAGFSDKSDGELMSRLAPYFRPEFLNRFNGVIEFSTLSKDDLKQIVDLMLADVNQTLAKKELT
LQVSDDVKNHLIEDGYDEAMGARPLRRVIEQQIRDQVTDFYLDNPGEKKLSADLVDGQVVISAIIQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-133 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpL YP_003771790.1 ATP-dependent Clp protease ATP-binding subunit ClpL VFG0080 Protein 2e-153 50
clpL YP_003771790.1 ATP-dependent Clp protease ATP-binding subunit ClpL VFG0079 Protein 4e-137 44