Gene Information

Name : atkB (LEGAS_1882)
Accession : YP_003773349.1
Strain : Leuconostoc gasicomitatum LMG 18811
Genome accession: NC_014319
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1915745 - 1917799 bp
Length : 2055 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATGACTGAACATAGCCATCACAATATGGCCAACATGCCTATGACTGAAAATATGGCTGATCATGATATGTCACA
GCACCACATGCATATGGCTGCTGACCCTGGTATGTCTAATATGGATATGACTGACATGAAACGCCGCTTTTGGTGGTCTT
TTGGTTTAATGATCCCAATCATTCTCATCACACCTTTCATGGGTTTATCTTTACCATTCACACTAATTTTTCCTGGCAGT
AATTGGGTCACAGCTATACTCTCTGTGCTCCTTTATTTTATTGGTTCAAAGCCATTTTTTGATGGTGCCAAAAGTGAAAT
TAAAGCCAAAAAACCAGCAATGATGAGCCTTGTTAGCATGGGACTACTAGTTACGTTTTGGTATTCAATCTATGCTTTAC
TAGCCAATCAATTCGTTCATGGTACTCATATCATGGATTTTTTCTGGGAATTTGCTACCTTAACGGTCATTATGCTATTA
GGTCATCGTATTGAAATGGCAGCAACCATGAAAGCTGGTGATGCCACAGATAAATTACGAGCATTAATGCCAAATAGTGC
CCATGTCAGGCATGGCGATATGATAATGGATATGCCGCTTCATACATTGAAACCTGGCATGATTGTCCAAGTATTAGCAG
GAGAAGCATTTCCAGCAGATGGTGTCGTAATCACAGGTCACAGTCAAGTTGATGAATCTCTTATGACTGGTGAAAGTCAA
CTCATTGATAAGTCTGAAAATAGTCCTGTTGTCGGTGGCACAATTAATGGCAATGGCTCGTTAGATTTGAGATTAACTCA
AGTTGGTAACAATTCTTTTGTAGGTCAATTGCAGGGTGTCCTAGCAACATCACAAGATCAAAAATCACGTGTTGAAACAC
TGGCCGATCGTGTCGCCAGCTACCTTTTCTGGTTAGCTTTAATTTTTGCTTTAGTTGCCTTAATTGTTTGGACCAGTCTA
CGTGGCTTGAGCGCTGCTATTAATATTGCCGTCACTGTCCTCGTGATTGCCTGTCCACACGCACTTGGCTTAGCTGTGCC
ATTAGTTATTCAACGTACAAAATCAGTAGCCGCCGCACAGGGCATTTTAATTAAAAATCGTAAGGCATTAACCACCGCAA
ATCATTTACAATTTGCTTTGATGGACAAAACAGGGACGTTGACAACCGGAAAATTTAGCGTCAATCGTATTATCACTTAT
GGTTTAGATGAAACACAAGCCGTTGCTATTATGTCAGCGCTAGATTCGCAGTCAACTCATCCACTCGCACAATCAATTAC
AGCATATAGTCATCAAATTCAGGCCCCTCAGTTACAAGCCGAAGATGTCATAAACCTTGCTGGTTATGGTGTTTCTGGTA
TGGTCAATAATACACATTATTTGTTAGTATCTGAACGTTTTTTATCTGAAAAGCATATATTATTCACACCATTACATGAC
GAGGGTTCAATTTCATATTTATTAAAACATGATCAAGTTGTTGCAGCCATTTCACAAGGTGATACTGTTAGAGACACAGC
ATCTGAATTCGTAAAGCATCTTGTTCAACTAGGTATCACGCCTGTTCTTGTCACTGGTGATAACATAAAAGCGGCACAAG
ATGTTGCTGCACAATTAGATATCGACGCTATTCACGCCCAAGTCTCGCCTCAAGAGAAAATTGCCCTAGTCATTAAATAC
CAACAACTAGGTGATGTTATGATGATTGGTGATGGCATAAATGACGCCCCTGCACTTGCGCAAGCAAACTTGTCGATAGC
TATCGGAGCTGGCACGCAAGTCGCACAAGCTGCAGCTGATGCTGTACTGATTGCTAATCAGTTACCAAAAATTATTGATT
TTCTACAACTCATTAAACGCGCTCATACAAAACAAATTCAAAACTTATGGTGGGGGGCCGGATATAATATTATCGCTATT
CCTTTAGCTGCGGGTGTTTTAGCTGCCATGGGTGTAATGCTCAATCCAATGATTGGTGCCATTGTGATGTCACTTTCAAC
GATTATTGTGACACTTAATGCGATGACGCTTAAAGCGTCACAAAACCAAAAATAA

Protein sequence :
MKMTEHSHHNMANMPMTENMADHDMSQHHMHMAADPGMSNMDMTDMKRRFWWSFGLMIPIILITPFMGLSLPFTLIFPGS
NWVTAILSVLLYFIGSKPFFDGAKSEIKAKKPAMMSLVSMGLLVTFWYSIYALLANQFVHGTHIMDFFWEFATLTVIMLL
GHRIEMAATMKAGDATDKLRALMPNSAHVRHGDMIMDMPLHTLKPGMIVQVLAGEAFPADGVVITGHSQVDESLMTGESQ
LIDKSENSPVVGGTINGNGSLDLRLTQVGNNSFVGQLQGVLATSQDQKSRVETLADRVASYLFWLALIFALVALIVWTSL
RGLSAAINIAVTVLVIACPHALGLAVPLVIQRTKSVAAAQGILIKNRKALTTANHLQFALMDKTGTLTTGKFSVNRIITY
GLDETQAVAIMSALDSQSTHPLAQSITAYSHQIQAPQLQAEDVINLAGYGVSGMVNNTHYLLVSERFLSEKHILFTPLHD
EGSISYLLKHDQVVAAISQGDTVRDTASEFVKHLVQLGITPVLVTGDNIKAAQDVAAQLDIDAIHAQVSPQEKIALVIKY
QQLGDVMMIGDGINDAPALAQANLSIAIGAGTQVAQAAADAVLIANQLPKIIDFLQLIKRAHTKQIQNLWWGAGYNIIAI
PLAAGVLAAMGVMLNPMIGAIVMSLSTIIVTLNAMTLKASQNQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 4e-91 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
atkB YP_003773349.1 copper-translocating P-type ATPase BAC0079 Protein 7e-124 44
atkB YP_003773349.1 copper-translocating P-type ATPase BAC0383 Protein 1e-116 42