|
Name : thiC (AMED_8571) Accession : YP_003770668.1 Strain : Amycolatopsis mediterranei U32 Genome accession: NC_014318 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 9409871 - 9411481 bp Length : 1611 bp Strand : + Note : - DNA sequence : GTGAAAGTGACCACCGGTCCGATCACCGGCTCGCACAAGGCCTACCAGCAGACCGAATCCGGGCTCCGCGTCCCTGTCCG GCGGATCGATCTCTCCAATGGTGAGCAGTTCGACGTCTATGACACTTCGGGCCCGTACACCGATCCGGACGTCGAGATCG ACGTCCACAGTGGACTTCACCGGCTGCGCGCCGGCTGGGCCGACGGGCGTGAGCACAACACCCAGCTCGGCTGGGCCAAA CAGGGCGTCATCACCCGCGAGATGGAGTACATCGCCGCCCGCGAACGGGTTTCGCCCGAATTCGTGCGCGACGAGGTCGC CCGCGGCCGCGCGGTGATCCCGGCCAACCGGAAGCACCCCGAGACTGAGCCGATGATCATCGGCAAGAACTTCCTGGTGA AGATCAACGCCAACATGGGCAACTCGGCGGTCTGGTCGTCGGTCGAGGAAGAGGTCGACAAGATGGTGTGGGCGACCCGC TGGGGCGCCGACACGATCATGGACCTCTCCACCGGCAAGCGGATCCACGAAACGCGGGAGTGGATCATCCGCAACTCGCC GGTGCCGGTCGGCACCGTGCCGATCTACCAGGCGCTGGAAAAGGTCGACGGCGAACCGGAAAAGCTGTCGTGGGAGGTGT ACCGCGACACCATCATCGAGCAGTGCGAGCAGGGTGTCGACTACGTCACCGTGCACGCCGGCGTGCTGCTGCGCTACATC CCGCTGACCGCGCGGCGCGTCACCGGCATCGTCAGCCGCGGCGGGTCGATCATGGCCGCGTGGTGCCTCGCGCACCACCA AGAGTCCTTTTTGTACACCCACTTCGAGGAACTCTGCGAGATCCTCCGGCAGTACGACGTCACGTTCTCGCTCGGCGACG GCCTGCGCCCGGGCTCGATCGCCGACGCGAACGACCGCGCCCAGTTCGCCGAGCTGGAAACCCTCGGCGAACTGACGCAC ATCGCGCGCTCGCACGACGTTCAGGTGATGATCGAGGGCCCCGGTCACGTGCCGATGCACAAGATCAAGGAGAACGTCGA GCTCGAGGAAAAGCTCTGCGGCGAGGCGCCGTTCTACACCCTCGGCCCGCTCGCGACGGACATCGCGCCGGCGTACGACC ACATCACGTCGGCCATCGGCGCGGCGCAGATCGGCTGGTACGGCACGGCGATGCTGTGTTACGTCACGCCGAAGGAGCAC CTCGGCCTGCCCAACCGCGACGACGTCAAGACCGGCGTGATCACGTACAAGATCGCCGCGCACGCCGCGGACCTGGCCAA GGGGCACAAGTACGCACAGGAGTGGGACGACGAGCTGTCCAAGGCACGTTTCGAGTTCCGCTGGAACGACCAGTTCAACC TGTCGCTCGACCCGGACACCGCGCGCTCGTTCCACGACGAAACCCTCCCCGCCGAGCCGGCCAAGACCGCGCACTTCTGC TCCATGTGCGGCCCGAAGTTCTGCTCGATGCGGATCACCCAGGACGTACGCAAGTACGCCGAGGAGCACGGACTGTCCAC TGTGGAGGCGATCGAGGCCGGGATGGCTTCGAAGTCGGCGGAGTTCACCGAGTCCGGCGGCCAGGTCTATCTGCCGGTGG TGCAGCCGTGA Protein sequence : MKVTTGPITGSHKAYQQTESGLRVPVRRIDLSNGEQFDVYDTSGPYTDPDVEIDVHSGLHRLRAGWADGREHNTQLGWAK QGVITREMEYIAARERVSPEFVRDEVARGRAVIPANRKHPETEPMIIGKNFLVKINANMGNSAVWSSVEEEVDKMVWATR WGADTIMDLSTGKRIHETREWIIRNSPVPVGTVPIYQALEKVDGEPEKLSWEVYRDTIIEQCEQGVDYVTVHAGVLLRYI PLTARRVTGIVSRGGSIMAAWCLAHHQESFLYTHFEELCEILRQYDVTFSLGDGLRPGSIADANDRAQFAELETLGELTH IARSHDVQVMIEGPGHVPMHKIKENVELEEKLCGEAPFYTLGPLATDIAPAYDHITSAIGAAQIGWYGTAMLCYVTPKEH LGLPNRDDVKTGVITYKIAAHAADLAKGHKYAQEWDDELSKARFEFRWNDQFNLSLDPDTARSFHDETLPAEPAKTAHFC SMCGPKFCSMRITQDVRKYAEEHGLSTVEAIEAGMASKSAEFTESGGQVYLPVVQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-176 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-176 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 5e-164 | 59 |
