Gene Information

Name : AMED_8464 (AMED_8464)
Accession : YP_003770562.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 9302084 - 9302770 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
GTGACGCCCGTGCTGCGCGTGCACGAGGTCACGCGCACCTACCCCGGCGAGGTCGCCGCGCTCGACGGCGTCTCGCTCTC
GCTGGAAGACGGCGAGATGGTGGCGATCGTCGGGCCGTCCGGGTCCGGCAAGTCCACCCTGCTGCACCTGATGGGCACGC
TGGACCGGCCGTCGTCGGGCCGGGTGGAGCTGCGCGGCCACGACGTCGCCGCGCTGCCCGACCGCAAGGTCTCGGCGCTG
CGGTCGCGCTGGATCGGGTTCGTGTTCCAGCAGTTCTTCCTCGACGAAGGGATGAGTGCGGTGGACAACGTGTGCACCGG
CCTGCTCTACGCCGGGGTGCCGCGGCGACGGCGGCGGGCGCGGGCGCTGGCGGCGCTCGACCGCGTCAAGCTCGGGCACC
GGGCGTGGCACCGCCCCGGCGAGCTCTCCGGCGGCGAACGCCAGCGCGTCGCGATCGCCAGGGCGGTGGTCAACGACCCG
GCGATCCTGCTGGCCGACGAGCCGACCGGCAACCTCGACACCGGCACCGGCGCTTCGGTGCTCTCGCTGCTGGGCGAGCT
GTCCACCGGCGGCACCACGATCGTCGTGATCACCCACGACCGCGAGATCGCGGCAGGCATGCCCCGCCGGATCGAGCTGC
TCGACGGGCGCCTGCGCCTGGACACCGGCCTGGTGGGTGCGCGATGA

Protein sequence : 
MTPVLRVHEVTRTYPGEVAALDGVSLSLEDGEMVAIVGPSGSGKSTLLHLMGTLDRPSSGRVELRGHDVAALPDRKVSAL
RSRWIGFVFQQFFLDEGMSAVDNVCTGLLYAGVPRRRRRARALAALDRVKLGHRAWHRPGELSGGERQRVAIARAVVNDP
AILLADEPTGNLDTGTGASVLSLLGELSTGGTTIVVITHDREIAAGMPRRIELLDGRLRLDTGLVGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-24 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-21 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMED_8464 YP_003770562.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 6e-29 50
AMED_8464 YP_003770562.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 5e-40 49
AMED_8464 YP_003770562.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 6e-28 43