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Name : vanH (AMED_8290) Accession : YP_003770390.1 Strain : Amycolatopsis mediterranei U32 Genome accession: NC_014318 Putative virulence/resistance : Resistance Product : D-lactate dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1052 EC number : - Position : 9116519 - 9117472 bp Length : 954 bp Strand : - Note : - DNA sequence : ATGACGATCTACGGGTGTGCACCCGACGAAGCCGTGCTGTTCCGGGAGATGGCGCCGGGCTTCGGGGTGACACCGACCAT CACCGGTGCGGCGGTGTCCGAGGCCAACGCCGCACTGGCGGCCGGTAACCGGTGCGTCAGCGTCGGGCACAAGACGCCGC TCACCCGGAGAACTCTTCTCGCGCTCAGCCGGGTCGGCGTCACCTACGTCTCCACGAGGAGCGTCGGCTACGACCACATC GACGTCGGATACGCCCGGAGCGTCGGCATTTCCGTCGGGAACGTCGCCTATTCGCCGGACAGCGTGGCCGACTACACGCT GATGCTGATGTTGATGCTCGTGCGGGACGCCAAGTCCGTCATCCGCCGCGCGGAGGAGCACGACTACCGGCTGAACGACG TGCGCGGGAAAGAGCTGCGCGATCTGACCGTCGGGGTGGTCGGGACCGGACGCATCGGTTCCGCCGTCGTCGGCCGGTTG CGCGGGTTCGGGGCTCGGGTGGTGGCTCACGACTGCTGTCCCCAGGCCGGCCTCGACTACGTCGAACTCGACGAACTGCT GCGGCTGAGCGACATCGTCACGCTCCACACGCCACTCGACGCCGGAACGCACCACCTCCTGGACCGACGGCGGCTCGAGC GGATGAAGCCCGGAGCGTTCGTCGTCAACACCGGGCGAGGCCCCCTTCTCGACACCGAGGCGCTCGTCGCGGCACTGGAA AACGGCAGGCTGGGCGGCGCCGCGCTGGACGTCCTCGAAGGGGAAGAAGGCGTCTTCTACGCCGACTGCCGCGATCGGCC CGTCGACAGCGACCTGCTGGTGCGGCTGCAGAAGCTGCCGAACGTGCTGATCAGCCCGCACACCGCGTACTACACCGACC ACGCGCTCGGCGACACCGTCGAAAACTCCATCATCAACTGCTTGAACTTCGAAAGCGGGAAGCGGCATGAATAG Protein sequence : MTIYGCAPDEAVLFREMAPGFGVTPTITGAAVSEANAALAAGNRCVSVGHKTPLTRRTLLALSRVGVTYVSTRSVGYDHI DVGYARSVGISVGNVAYSPDSVADYTLMLMLMLVRDAKSVIRRAEEHDYRLNDVRGKELRDLTVGVVGTGRIGSAVVGRL RGFGARVVAHDCCPQAGLDYVELDELLRLSDIVTLHTPLDAGTHHLLDRRRLERMKPGAFVVNTGRGPLLDTEALVAALE NGRLGGAALDVLEGEEGVFYADCRDRPVDSDLLVRLQKLPNVLISPHTAYYTDHALGDTVENSIINCLNFESGKRHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2295 | NP_815952.1 | D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 5e-87 | 59 |
| vanHB | YP_008394258.1 | VanH protein, D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 2e-86 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| vanH | YP_003770390.1 | D-lactate dehydrogenase | AF155139.2.orf4.gene | Protein | 9e-92 | 62 |
| vanH | YP_003770390.1 | D-lactate dehydrogenase | NC_014475.1.orf2.gen | Protein | 3e-91 | 59 |
| vanH | YP_003770390.1 | D-lactate dehydrogenase | NC_005054.2598279.p0 | Protein | 3e-91 | 59 |
| vanH | YP_003770390.1 | D-lactate dehydrogenase | U35369.1.gene5.p01 | Protein | 1e-86 | 59 |
| vanH | YP_003770390.1 | D-lactate dehydrogenase | AF310956.2.orf4.gene | Protein | 4e-87 | 59 |
| vanH | YP_003770390.1 | D-lactate dehydrogenase | FJ349556.1.orf3.gene | Protein | 2e-87 | 56 |
| vanH | YP_003770390.1 | D-lactate dehydrogenase | AF130997.1.orf3.gene | Protein | 2e-78 | 56 |
