Name : gabD (AMED_7877) Accession : YP_003769985.1 Strain : Amycolatopsis mediterranei U32 Genome accession: NC_014318 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 8665540 - 8667003 bp Length : 1464 bp Strand : - Note : - DNA sequence : ATGAGCGCGAACACCGAGTCCGGCGTCGTCGAGGCGGTCGGCAAGGAACTGTTCATCGGCGGCAAGTGGGTCGCCGCCCA GGACGGCAAGACCTTCCCGGTGGTGGACCCGGCCACCGGCAAGGAGCTTTGTCACGTCGCCGACGCCTCGCCGTCGGACG GCGTCGCGGCGCTGGACGCCGCCGTCGCGGCGCAGACCGAGTTCGCGAAGATGGCGCCCCGCGAGCGCGGCGAGATCCTG CGCCGCGCCTACGAGCTGCTGATGCGGCGCCAGGAGGAACTGGCGCTGCTGATGACCCTGGAGATGGGCAAGCCGCTCGC CGAGTCGAAGGGCGAGATCGCCTACGCCGCGGAGTTCTTCCGCTGGTTCGCCGAGGAAGCCGTCCGCATCGACGGCGGCT ACGCGACCGCCCCGAACGGCGCGGGCCGGTTTCTCATCACCAAGCAGCCGGTCGGGCCGACGTTGCTGATCACGCCGTGG AACTTCCCGATGGCGATGGGCACCCGCAAGATCGGCCCGGCGATCGCCGCCGGCTGCACGGCGGTGATCAAGCCCGCCGC CCAGACGCCGCTGTCGATGCTCGCGCTGGCGGGAATCCTCGCCGAGGCGGGACTGCCCGAAGGCGTGCTCAACGTCGTCA CGACCAGCGACTCCGGCGGCGTGATGGAGCCGCTGATCCGTGACGGCCGCGCCCGCAAGCTCTCCTTCACCGGCTCGACC GGGGTCGGCCGCAAGCTGCTCGAACAGTGCGCCGACAAGATCCTGCGGACGTCGATGGAGCTGGGCGGCAACGCGCCGTT CCTGGTCTTCGACGACGCGGACATGGACGCGGCCATCGAGGGCGCCATGCAGGCGAAGATGCGCAACATCGGCGAGGCGT GCACCGCGGCGAACCGGTTCTACGTGCAGCGCGGCGTCGTCGACGAGTTCGCGCGGCGGCTGACCGAACGCATGCAGGCG CTGCCGATGGGCCGCGGCACCGAGAAGGACGTCGTCGTCGGCCCGCTGATCGACGAGAAGGCCGTCGACAAGGTGACCGA GCTGGTCAAGGACGCCACCGACCGCGGCGCTCGGATCCTCACCGGCGGCTCGGGCGTCGACGGGCCGGGGCACTTCTACC CGGCCACGGTGCTCACCGACGTCCCGCAGGAGGCGCGGCTGACGCACGAGGAGATCTTCGGGCCGGTCGCCCCGATCACG CCGTTCGACACCGAAGAAGAGGCGGTGGCGAAGGCGAACGACACCGAGTTCGGGCTCGTTTCCTACCTCTTCACCAGCGA CCTCAAGCGCGCCCTGCGGGTTTCGGAAGCGCTGGAAGCCGGGATGATCGGGCTCAACCAGGGCATCGTCTCGAACCCGG CGGCGCCGTTCGGCGGGATCAAGCAGTCCGGGCTCGGCCGCGAAGGCGGCTCGGTCGGCATCGACGAGTTCCTGGAGACC AAGTACATCGCGGTCGCCCTGTGA Protein sequence : MSANTESGVVEAVGKELFIGGKWVAAQDGKTFPVVDPATGKELCHVADASPSDGVAALDAAVAAQTEFAKMAPRERGEIL RRAYELLMRRQEELALLMTLEMGKPLAESKGEIAYAAEFFRWFAEEAVRIDGGYATAPNGAGRFLITKQPVGPTLLITPW NFPMAMGTRKIGPAIAAGCTAVIKPAAQTPLSMLALAGILAEAGLPEGVLNVVTTSDSGGVMEPLIRDGRARKLSFTGST GVGRKLLEQCADKILRTSMELGGNAPFLVFDDADMDAAIEGAMQAKMRNIGEACTAANRFYVQRGVVDEFARRLTERMQA LPMGRGTEKDVVVGPLIDEKAVDKVTELVKDATDRGARILTGGSGVDGPGHFYPATVLTDVPQEARLTHEEIFGPVAPIT PFDTEEEAVAKANDTEFGLVSYLFTSDLKRALRVSEALEAGMIGLNQGIVSNPAAPFGGIKQSGLGREGGSVGIDEFLET KYIAVAL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 8e-97 | 50 |
cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 6e-92 | 44 |