Gene Information

Name : AMED_6941 (AMED_6941)
Accession : YP_003769062.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 7669267 - 7669980 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence : 
ATGCCGAACCTGCTGGTGGTGGAAGACGACGCGGCGATCGGCAGCGTGCTCGAATCGACCCTGCGACTGCACGGTCACCA
GGTGTGCTGGCGCCGCGACGGGCGGACCGCCCTGCAAGCCGCCGAACCCGGGGATTTCGACCTCGTGCTGCTCGACCTCG
GCCTGCCCGACCTGGACGGCGTCGAGGTCTGCCGCCGCCTGCGGGCCGCGCTGCCCGGCGCGGTGCTGGTCATCCTCACC
GCGCGGCAGGAGGAGATGGACGTCGTCGTCGGCCTCGACGCCGGGGCCGACGACTACCTCACCAAGCCGATCCGGCTGGG
CGAACTGCTCGCCCGGGTGCGGGCGCACCTGCGGCGCGGCGCGCCGGCCGGGGCGCGGCCCCCGGTGACCATCGGCGGGC
TGACCGTCGACATCGCCGGCCGCCGGGCCACCCTGGGCGGGCGTGAAGTGGTGCTGCGGGCCAAGGAGTTCGACCTGCTG
GCCCGGCTGGCCGAGCAGCCCGGCGTCGCGGTCAGCCGGGAGACGCTGATGTCCGAGGTCTGGGACGCGCACTGGTACGG
CTCGACGAAGACGCTGGACGTGCACATCGCGGCGGTGCGCCGCAAGCTCTCGGCTTGTGCATCCCAGCCCGGCGACGAGG
TGCCGCGGATCGTCACCCTGCGCGGGCACGGCTACCGGCTGGAAGACCCGGCGCGCACCGCCGCCGAAGGGTAG

Protein sequence : 
MPNLLVVEDDAAIGSVLESTLRLHGHQVCWRRDGRTALQAAEPGDFDLVLLDLGLPDLDGVEVCRRLRAALPGAVLVILT
ARQEEMDVVVGLDAGADDYLTKPIRLGELLARVRAHLRRGAPAGARPPVTIGGLTVDIAGRRATLGGREVVLRAKEFDLL
ARLAEQPGVAVSRETLMSEVWDAHWYGSTKTLDVHIAAVRRKLSACASQPGDEVPRIVTLRGHGYRLEDPARTAAEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-15 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMED_6941 YP_003769062.1 two-component system response regulator BAC0083 Protein 4e-19 42
AMED_6941 YP_003769062.1 two-component system response regulator BAC0197 Protein 4e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMED_6941 YP_003769062.1 two-component system response regulator VFG1389 Protein 2e-20 44
AMED_6941 YP_003769062.1 two-component system response regulator VFG0596 Protein 1e-15 42