Gene Information

Name : AMED_6582 (AMED_6582)
Accession : YP_003768711.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Resistance
Product : multidrug ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 7268447 - 7269352 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence : 
ATGACGATCGACGCCATCGACCTGACCAAGCAATACCGCGACGTTCTCGCGGTGGACGACGTGACGCTGCGCGTCGCACC
CGGCGAGATCTACGCCCTGCTCGGCCTCAACGGTGCCGGCAAGACGACCACGATCCGGATGCTGCTCGGCCTGCTGCGCC
CCACCCACGGCCAAGTACGGCTGTTCGGCGAACAGGTCGAACCCGGCCGCAACGCCGTCTGGGCCCAGGTCGGCTACCTC
GTCGAAACACCCTCCGCCTACCCGGAACTCACCGTCACCGAAAACCTCCAGGTGATCGCCCGGCTGCGCGGCCTACGCAA
CGAGAAAACCGTGACCGACGCCATCGCCCGGCTCGGCCTGCAACCCCACGCCCACCACCGCGCGCAAACGCTTTCCCTGG
GCAACAAGCAACGGCTCGGCCTGGCCAAAGCACTGCTGCACCAGCCCGAGCTGCTGATCCTCGACGAACCCGCCAACGGC
CTCGACCCCGCCGGCGTCGCCGAGATCCGCACCCTGCTCCACGACCTCGCCCACCACGACGGCGTGACGATCCTGCTCTC
CAGCCACATCCTCACCGAAGTCGCCCGCCTGGCCGACCGCATCGGCGTCCTCGACCACGGACGGCTGGCCTGGGAAGGCA
GCACCGCCGACCTGACCGCGCAGGCCCGTCCACAGCTGCGCATCGCGGTACGAGACCGCGGTCGTGCTGCGGCCACGTTG
CGCGCGGCCGGCCATCCCGCCGAGGACGACGGAGACGGCGGGCTCATCCTCACCGGCGACCACGCGATCCGGCACCCCGA
CGAGATCGCCACCCGGCTCGTCACCGCGGGATGCCCGCCCACCCACCTCGCCGTGGAACAGGACGACCTGGAAACCTGCT
TCCTCCGCCTGGTCGATCCGCGATGA

Protein sequence : 
MTIDAIDLTKQYRDVLAVDDVTLRVAPGEIYALLGLNGAGKTTTIRMLLGLLRPTHGQVRLFGEQVEPGRNAVWAQVGYL
VETPSAYPELTVTENLQVIARLRGLRNEKTVTDAIARLGLQPHAHHRAQTLSLGNKQRLGLAKALLHQPELLILDEPANG
LDPAGVAEIRTLLHDLAHHDGVTILLSSHILTEVARLADRIGVLDHGRLAWEGSTADLTAQARPQLRIAVRDRGRAAATL
RAAGHPAEDDGDGGLILTGDHAIRHPDEIATRLVTAGCPPTHLAVEQDDLETCFLRLVDPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 5e-46 43
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 1e-41 43
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 1e-34 41
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 1e-34 41