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Name : rpoE (AMED_6529) Accession : YP_003768662.1 Strain : Amycolatopsis mediterranei U32 Genome accession: NC_014318 Putative virulence/resistance : Unknown Product : ECF subfamily RNA polymerase sigma-70 factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 7215393 - 7216061 bp Length : 669 bp Strand : + Note : - DNA sequence : GTGACATGGTCGGCCGCGCGCGCCGGATGGTTCCCGCGACTTTCGGTCAAGATCGTTTTCAACCGGATCGGCGTGGGCGA CGTAGTAGCGGGTGTGACGCCAGAACGCGCGGACGACGCCGACATCACGCGGTGGGCCCTGCTCGCCGGCCGCGGCGACG GCCCGGCCCTCGAGCAGTTCCTCCGCTCCACCCAGCCGTATGTCTGGCGGTTCGTCGCCGGGCTCGCCGACGCGCAGTCC GCGGACGACCTGACCCAGGAGACCTACCTGCGGGCGCTGGGCAGCCTGCCCCGGTTCAAGGGCGATTCGTCGGCCCGGAC CTGGCTGCTGTCGATCGCCCGGCGCACGGTCGCCGACCACATCCGCGCCCTTCAGGCCCGCCCGCGGCAGGCGTCGGTGA CCGACTGGGAAGCCGCCGCCGAACGCGCCGAACCATCCCGCGCCGAGCGGATCGACGAGCAGGTCGTCCTCGACCAGCTC GTCAAGGCCCTCGACCCTGACCGCCGGGTCGCGTTCGTGCTCACCCAGACCCTCGGGCTGTCCTATGTGGATGCCGCGCA GGTGTGCGGCTGCCCGGTCGGCACCATCCGCTCCCGTGTCGCCCGGGCGCGGGAAGACCTGCTGGCGGCGATGGCCGGGA CCCGGCCGGGTTATCCGGCGGTCGGCTGA Protein sequence : MTWSAARAGWFPRLSVKIVFNRIGVGDVVAGVTPERADDADITRWALLAGRGDGPALEQFLRSTQPYVWRFVAGLADAQS ADDLTQETYLRALGSLPRFKGDSSARTWLLSIARRTVADHIRALQARPRQASVTDWEAAAERAEPSRAERIDEQVVLDQL VKALDPDRRVAFVLTQTLGLSYVDAAQVCGCPVGTIRSRVARAREDLLAAMAGTRPGYPAVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 8e-25 | 48 |
