Gene Information

Name : pdxS (AMED_5314)
Accession : YP_003767478.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 5889591 - 5890532 bp
Length : 942 bp
Strand : -
Note : -

DNA sequence :
GTGTCGAAAGGCCTCGTCGTGTCCGAGCAGCAGCCCACCCCCTCCACCGGTACCGTCCAGTCCGTCACCGGCACCGCCAA
GGTGAAGCGCGGCATGGCCGAGATGCTCAAGGGCGGCGTGATCATGGACGTGGTCACCGCCGAGCAGGCGAAGATCGCCG
AAGACGCCGGCGCGGTCGCGGTGATGGCGCTGGAGCGCGTGCCCGCCGACATCCGCGCCCAGGGCGGCGTCGCCCGGATG
AGCGACCCCGACCTGATCGACGGCATCATCGAGACCGTCTCGATCCCGGTGATGGCGAAGGCCCGCATCGGCCACTTCGT
CGAGGCGCAGGTCCTGCAGTCCCTCGGCGTGGACTACGTCGACGAGTCCGAGGTCCTCACCCCGGCCGACTACGCCAACC
ACATCGACAAGTGGGCCTTCACCGTCCCCTTCGTCTGCGGCGCGACCAACCTCGGCGAGGCGCTGCGGCGGATCACCGAG
GGCGCGGCGATGATCCGCTCGAAGGGCGAGGCCGGCACCGGCGACGTCTCCAACGCCACCACCCACATGCGGCAGATCCG
GCAGGAGATCCGGCGGCTGACCTCGCTGCCGGAGGACGAGTTGTTCGTCGCGGCCAAGGAACTGCAGGCGCCGTACGAGC
TGGTGCGCGAGGTGGCACAGGCCGGGAAGCTGCCGGTGGTGCTGTTCACCGCGGGCGGCATCGCGACCCCGGCCGACGCG
GCGATGATGATGCAGCTCGGCGCCGAGGGCGTGTTCGTCGGCTCGGGCATCTTCAAGTCCGGCAACCCGGCCCAGCGCGC
CGAGGCGATCGTCAAGGCGACGACGTTCTACGACGACCCGGACGTCCTCGCCAAGGTCTCCCGCGGCCTGGGCGAGGCGA
TGGTCGGCATCAACGTCGAGGAGCTGCCGGAGCCGCACCGCCTCGCCGAGCGCGGCTGGTAA

Protein sequence :
MSKGLVVSEQQPTPSTGTVQSVTGTAKVKRGMAEMLKGGVIMDVVTAEQAKIAEDAGAVAVMALERVPADIRAQGGVARM
SDPDLIDGIIETVSIPVMAKARIGHFVEAQVLQSLGVDYVDESEVLTPADYANHIDKWAFTVPFVCGATNLGEALRRITE
GAAMIRSKGEAGTGDVSNATTHMRQIRQEIRRLTSLPEDELFVAAKELQAPYELVREVAQAGKLPVVLFTAGGIATPADA
AMMMQLGAEGVFVGSGIFKSGNPAQRAEAIVKATTFYDDPDVLAKVSRGLGEAMVGINVEELPEPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-116 81
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-116 81
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-116 81